RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ZNF366Q8N895 744 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 FAM3CQ92520 227 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 PSKH2Q96QS6 385 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ACOX2Q99424 681 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 VAT1Q99536 393 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 GORASP1Q9BQQ3 440 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ERP44Q9BS26 406 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 TM6SF2Q9BZW4 377 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 DPH5Q9H2P9 285 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 MUTYHQ9UIF7 546 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 SNX24Q9Y343 169 aa19.51■□□□□ 0.71
PSPC1-203ENST00000471658 ESYT3A0FGR9 886 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 WASH3PC4AMC7 463 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 TIMM44O43615 452 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 OPHN1O60890 802 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 GLULP15104 373 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 IVDP26440 423 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 ADCY8P40145 1251 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 RHOAP61586 193 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 DSC2Q02487 901 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 ZNF234Q14588 700 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 EIF4HQ15056 248 aaKnown RBP19.5■□□□□ 0.71
PSPC1-203ENST00000471658 PREPLQ4J6C6 727 aaPredicted RBP19.5■□□□□ 0.71
PSPC1-203ENST00000471658 GLE1Q53GS7 698 aaKnown RBP19.5■□□□□ 0.71
PSPC1-203ENST00000471658 ATXN7L2Q5T6C5 722 aaPredicted RBP19.5■□□□□ 0.71
PSPC1-203ENST00000471658 DUPD1Q68J44 220 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 SPATA22Q8NHS9 363 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 ETNK1Q9HBU6 452 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 PAK5Q9P286 719 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 RSPH14Q9UHP6 348 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 PLA2G4CQ9UP65 541 aa19.5■□□□□ 0.71
PSPC1-203ENST00000471658 KRBA1A5PL33 1030 aa19.49■□□□□ 0.71
PSPC1-203ENST00000471658 SRPRAP08240 638 aaKnown RBP19.49■□□□□ 0.71
PSPC1-203ENST00000471658 ACTN2P35609 894 aa19.49■□□□□ 0.71
PSPC1-203ENST00000471658 TNFRSF4P43489 277 aa19.49■□□□□ 0.71
PSPC1-203ENST00000471658 RPL21P46778 160 aaKnown RBP19.49■□□□□ 0.71
PSPC1-203ENST00000471658 GEMIN4P57678 1058 aaKnown RBP19.49■□□□□ 0.71
PSPC1-203ENST00000471658 GUCY2DQ02846 1103 aa19.49■□□□□ 0.71
PSPC1-203ENST00000471658 ERCC6LQ2NKX8 1250 aa19.49■□□□□ 0.71
PSPC1-203ENST00000471658 FNDC3BQ53EP0 1204 aaKnown RBP19.49■□□□□ 0.71
PSPC1-203ENST00000471658 ARRDC2Q8TBH0 407 aa19.49■□□□□ 0.71
PSPC1-203ENST00000471658 FRS2Q8WU20 508 aa19.49■□□□□ 0.71
PSPC1-203ENST00000471658 MGME1Q9BQP7 344 aa19.49■□□□□ 0.71
PSPC1-203ENST00000471658 RAB6BQ9NRW1 208 aa19.49■□□□□ 0.71
PSPC1-203ENST00000471658 UBP1Q9NZI7 540 aa19.49■□□□□ 0.71
PSPC1-203ENST00000471658 INSIG1O15503 277 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 ATP9BO43861 1147 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 BNIP3LO60238 219 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 ZNF189O75820 626 aaPredicted RBP19.48■□□□□ 0.71
PSPC1-203ENST00000471658 CHRM1P11229 460 aaPredicted RBP19.48■□□□□ 0.71
PSPC1-203ENST00000471658 HLA-EP13747 358 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 WASP42768 502 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 KIR2DL1P43626 348 aaPredicted RBP19.48■□□□□ 0.71
PSPC1-203ENST00000471658 GRSF1Q12849 480 aaKnown RBP eCLIP19.48■□□□□ 0.71
PSPC1-203ENST00000471658 PARP6Q2NL67 630 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 C22orf39Q6P5X5 142 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 SUGP1Q8IWZ8 645 aaKnown RBP19.48■□□□□ 0.71
PSPC1-203ENST00000471658 BBS5Q8N3I7 341 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 OR6K2Q8NGY2 324 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 CASKIN2Q8WXE0 1202 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 ERLEC1Q96DZ1 483 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 RBM15Q96T37 977 aaKnown RBP eCLIP19.48■□□□□ 0.713e-7■■■■□ 24.9
PSPC1-203ENST00000471658 SEMA3CQ99985 751 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 GBA3Q9H227 469 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 EPB41L5Q9HCM4 733 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 THAP10Q9P2Z0 257 aaPredicted RBP19.48■□□□□ 0.71
PSPC1-203ENST00000471658 NDRG2Q9UN36 371 aaKnown RBP19.48■□□□□ 0.71
PSPC1-203ENST00000471658 STARD13Q9Y3M8 1113 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 F5P12259 2224 aa19.48■□□□□ 0.71
PSPC1-203ENST00000471658 CXorf51AA0A1B0GTR3 108 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 TCRBV7S3A2A0A539 114 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 BHMG1C9JSJ3 638 aaPredicted RBP19.47■□□□□ 0.71
PSPC1-203ENST00000471658 MT-CYBP00156 380 aaPredicted RBP19.47■□□□□ 0.71
PSPC1-203ENST00000471658 MMP2P08253 660 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 CR2P20023 1033 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 GKP32189 559 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 TIE1P35590 1138 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 IL12RB1P42701 662 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 SCNN1BP51168 640 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 ST8SIA6P61647 398 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 NUDT18Q6ZVK8 323 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 Q6ZVU0 165 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 UCMAQ8WVF2 138 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 UBXN4Q92575 508 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 OXNAD1Q96HP4 312 aaPredicted RBP19.47■□□□□ 0.71
PSPC1-203ENST00000471658 FCRL5Q96RD9 977 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 MLPHQ9BV36 600 aaPredicted RBP19.47■□□□□ 0.71
PSPC1-203ENST00000471658 ANKZF1Q9H8Y5 726 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 NOD2Q9HC29 1040 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 ARHGEF3Q9NR81 526 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 CACNA2D2Q9NY47 1150 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 FBXL21Q9UKT6 434 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 UTP11Q9Y3A2 253 aaKnown RBP19.47■□□□□ 0.71
PSPC1-203ENST00000471658 DRD1P21728 446 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 PRKCHP24723 683 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 NNMTP40261 264 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 BASP1P80723 227 aaKnown RBP19.47■□□□□ 0.71
PSPC1-203ENST00000471658 C2orf27AQ580R0 203 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 ANKRD22Q5VYY1 191 aa19.47■□□□□ 0.71
PSPC1-203ENST00000471658 ITPRIPL1Q6GPH6 555 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms