RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 HTR7P34969 479 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 CCNHP51946 323 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-204ENST00000469443 YBEYP58557 167 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-204ENST00000469443 FAM193AP78312 1265 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 SIM1P81133 766 aaPredicted RBP18.62■□□□□ 0.57
PHGDH-204ENST00000469443 FOXC1Q12948 553 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 ZNF423Q2M1K9 1284 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 KCNT1Q5JUK3 1230 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 ERN2Q76MJ5 926 aaKnown RBP18.62■□□□□ 0.57
PHGDH-204ENST00000469443 PLPP6Q8IY26 295 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 CNTNAP3BQ96NU0 1288 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 HDAC8Q9BY41 377 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 CNTNAP3Q9BZ76 1288 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 TM6SF2Q9BZW4 377 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 TRIM7Q9C029 511 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 MRPL47Q9HD33 250 aaKnown RBP18.62■□□□□ 0.57
PHGDH-204ENST00000469443 ARHGAP20Q9P2F6 1191 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 AP4E1Q9UPM8 1137 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 DMTF1Q9Y222 760 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 PCDHB9Q9Y5E1 797 aa18.62■□□□□ 0.57
PHGDH-204ENST00000469443 CEP295Q9C0D2 2601 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 MAP1BP46821 2468 aaKnown RBP18.61■□□□□ 0.57
PHGDH-204ENST00000469443 TDRD6O60522 2096 aaKnown RBP18.61■□□□□ 0.57
PHGDH-204ENST00000469443 EIF3CLB5ME19 914 aaKnown RBP18.61■□□□□ 0.57
PHGDH-204ENST00000469443 H0Y8X5 98 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 KCNK3O14649 394 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 WNT9AO14904 365 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 DFNA5O60443 496 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 RNGTTO60942 597 aaKnown RBP18.61■□□□□ 0.57
PHGDH-204ENST00000469443 SERPING1P05155 500 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 MAT2AP31153 395 aaKnown RBP18.61■□□□□ 0.57
PHGDH-204ENST00000469443 CCT8P50990 548 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 TPI1P60174 286 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 SUZ12Q15022 739 aaKnown RBP18.61■□□□□ 0.57
PHGDH-204ENST00000469443 SLC45A4Q5BKX6 768 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 ERMARDQ5T6L9 678 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 NAPEPLDQ6IQ20 393 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 DBX2Q6ZNG2 339 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 VPS36Q86VN1 386 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 ZNF354CQ86Y25 554 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 UMODL1-AS1Q8N2C9 162 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 ARFGAP1Q8N6T3 406 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 SETD7Q8WTS6 366 aaKnown RBP18.61■□□□□ 0.57
PHGDH-204ENST00000469443 CPLX3Q8WVH0 158 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 EIF3CQ99613 913 aaKnown RBP18.61■□□□□ 0.57
PHGDH-204ENST00000469443 GPATCH2LQ9NWQ4 482 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 MYO1AQ9UBC5 1043 aa18.61■□□□□ 0.57
PHGDH-204ENST00000469443 HECAQ9UBI9 543 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-204ENST00000469443 LUC7L2Q9Y383 392 aaKnown RBP18.61■□□□□ 0.57
PHGDH-204ENST00000469443 FLRT2O43155 660 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 GSRP00390 522 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 ITGB7P26010 798 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 TRIP6Q15654 476 aaKnown RBP18.6■□□□□ 0.57
PHGDH-204ENST00000469443 PARP15Q460N3 678 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 SETMARQ53H47 684 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-204ENST00000469443 NEK5Q6P3R8 708 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 PEBP4Q96S96 227 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 NCAPGQ9BPX3 1015 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.6■□□□□ 0.57
PHGDH-204ENST00000469443 SNRNP25Q9BV90 132 aaKnown RBP18.6■□□□□ 0.57
PHGDH-204ENST00000469443 DHX35Q9H5Z1 703 aaKnown RBP18.6■□□□□ 0.57
PHGDH-204ENST00000469443 ZDHHC6Q9H6R6 413 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 DONSONQ9NYP3 566 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 PCSK1NQ9UHG2 260 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 PCOLCE2Q9UKZ9 415 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 WASF3Q9UPY6 502 aa18.6■□□□□ 0.57
PHGDH-204ENST00000469443 PTPRBP23467 1997 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 RASA4BC9J798 803 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 RASA4O43374 803 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 BUB1O43683 1085 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 PRPSAP2O60256 369 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 CBFA2T3O75081 653 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 LRCH4O75427 683 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 GYPCP04921 128 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 TPM3P06753 285 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 MIPP30301 263 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 NEK3P51956 506 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 SNRPD1P62314 119 aaKnown RBP18.59■□□□□ 0.57
PHGDH-204ENST00000469443 SERINC3Q13530 473 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 CA9Q16790 459 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 LEKR1Q6ZMV7 388 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 RYBPQ8N488 228 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-204ENST00000469443 MFSD2AQ8NA29 543 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 OR2AP1Q8NGE2 309 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 CASKIN2Q8WXE0 1202 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 HMCESQ96FZ2 354 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 LRIG1Q96JA1 1093 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 ELF4Q99607 663 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-204ENST00000469443 XPO4Q9C0E2 1151 aaKnown RBP18.59■□□□□ 0.57
PHGDH-204ENST00000469443 KLC2Q9H0B6 622 aa18.59■□□□□ 0.57
PHGDH-204ENST00000469443 LRRK1Q38SD2 2015 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 A0A1B0GTQ1 180 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 A0A1W2PQU0 124 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 PRAMEF26H0Y7S4 382 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 TLR4O00206 839 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 EEF2KO00418 725 aaKnown RBP18.58■□□□□ 0.56
PHGDH-204ENST00000469443 PCDHGA12O60330 932 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 TMCC1O94876 653 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 ACAP1Q15027 740 aa18.58■□□□□ 0.56
PHGDH-204ENST00000469443 INO80DQ53TQ3 878 aaPredicted RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms