RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 CCDC124Q96CT7 223 aaKnown RBP10.1□□□□□ -0.79
NUP50-214ENST00000469163 CCDC120Q96HB5 630 aa10.1□□□□□ -0.79
NUP50-214ENST00000469163 FEM1CQ96JP0 617 aa10.1□□□□□ -0.79
NUP50-214ENST00000469163 IFT22Q9H7X7 185 aa10.1□□□□□ -0.79
NUP50-214ENST00000469163 ZDHHC7Q9NXF8 308 aa10.1□□□□□ -0.79
NUP50-214ENST00000469163 GDAP2Q9NXN4 497 aa10.1□□□□□ -0.79
NUP50-214ENST00000469163 SRRDQ9UH36 339 aa10.1□□□□□ -0.79
NUP50-214ENST00000469163 ZNF229Q9UJW7 825 aa10.1□□□□□ -0.79
NUP50-214ENST00000469163 PCDHGA10Q9Y5H3 936 aa10.1□□□□□ -0.79
NUP50-214ENST00000469163 SNX8Q9Y5X2 465 aa10.1□□□□□ -0.79
NUP50-214ENST00000469163 CLDN5O00501 218 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 RSL1D1O76021 490 aaKnown RBP10.09□□□□□ -0.79
NUP50-214ENST00000469163 ZNF865P0CJ78 1059 aaPredicted RBP10.09□□□□□ -0.79
NUP50-214ENST00000469163 NELFEP18615 380 aaKnown RBP10.09□□□□□ -0.79
NUP50-214ENST00000469163 PTENP60484 403 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 DNASE1L3Q13609 305 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 PPP2R5DQ14738 602 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 C4orf46Q504U0 113 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 SLC45A4Q5BKX6 768 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 FRA10AC1Q70Z53 315 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 SLC15A4Q8N697 577 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 ASCC1Q8N9N2 400 aaKnown RBP10.09□□□□□ -0.79
NUP50-214ENST00000469163 TSPAN14Q8NG11 270 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 RDM1Q8NG50 284 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 GTF3C2Q8WUA4 911 aaPredicted RBP10.09□□□□□ -0.79
NUP50-214ENST00000469163 FAM172AQ8WUF8 416 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 SNX19Q92543 992 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 ERGIC2Q96RQ1 377 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 PAAF1Q9BRP4 392 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 TUBB6Q9BUF5 446 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 EPB41L4BQ9H329 900 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 NARFLQ9H6Q4 476 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 CISHQ9NSE2 258 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 CAB39Q9Y376 341 aaPredicted RBP10.09□□□□□ -0.79
NUP50-214ENST00000469163 A0A1W2PQC6 194 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 F8W8V4 182 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 STMND1H3BQB6 276 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 PEX1O43933 1283 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 MX2P20592 715 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 CD9P21926 228 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 BRCC3P46736 316 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 HSD17B7P56937 341 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 NME3Q13232 169 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 SNX17Q15036 470 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 AADATQ8N5Z0 425 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 TTC13Q8NBP0 860 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 C12orf43Q96C57 262 aaKnown RBP10.09□□□□□ -0.79
NUP50-214ENST00000469163 RBM15Q96T37 977 aaKnown RBP eCLIP10.09□□□□□ -0.79
NUP50-214ENST00000469163 AGPAT1Q99943 283 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 TMEM79Q9BSE2 394 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 KATNAL1Q9BW62 490 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 SLC2A11Q9BYW1 496 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 TMEM8AQ9HCN3 771 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 PLAGL2Q9UPG8 496 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 TMEM5Q9Y2B1 443 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 CORINQ9Y5Q5 1042 aa10.09□□□□□ -0.79
NUP50-214ENST00000469163 SEPT4O43236 478 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 SCO1O75880 301 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 KRT8P05787 483 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 HMBSP08397 361 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 EDNRBP24530 442 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 ICAM3P32942 547 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 TAP1Q03518 808 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 CSTF3Q12996 717 aaKnown RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 ATAD3BQ5T9A4 648 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 PRR23BQ6ZRT6 265 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 GALNT13Q8IUC8 556 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 SLC35G2Q8TBE7 412 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 ARHGEF26Q96DR7 871 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 SGF29Q96ES7 293 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 RBM14Q96PK6 669 aaKnown RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 USB1Q9BQ65 265 aaKnown RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 AGO3Q9H9G7 860 aaKnown RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 FBXO6Q9NRD1 293 aaPredicted RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 ARMCX1Q9P291 453 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 ARHGAP28Q9P2N2 729 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 TJP2Q9UDY2 1190 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 UGT2A1Q9Y4X1 527 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 CITO14578 2027 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 OR5K4A6NMS3 321 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 CCDC188H7C350 402 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 ASNA1O43681 348 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 AP1G1O43747 822 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 HUS1O60921 280 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 FKBP6O75344 327 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 MOCS2O96007 188 aaPredicted RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 ARL2P36404 184 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 SNTA1Q13424 505 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 RSBN1Q5VWQ0 802 aaPredicted RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 EPM2AIP1Q7L775 607 aaPredicted RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 PLPPR4Q7Z2D5 763 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 GOT1L1Q8NHS2 421 aaPredicted RBP10.08□□□□□ -0.8
NUP50-214ENST00000469163 KREMEN1Q96MU8 473 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 SLC29A1Q99808 456 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 GHITMQ9H3K2 345 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 PLK2Q9NYY3 685 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 ANKMY1Q9P2S6 941 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 MORF4L1Q9UBU8 362 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 PADI3Q9ULW8 664 aa10.08□□□□□ -0.8
NUP50-214ENST00000469163 AP4B1Q9Y6B7 739 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms