RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 THOP1P52888 689 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 MYL6P60660 151 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 YWHAGP61981 247 aaKnown RBP eCLIP11.95□□□□□ -0.5
VPS26A-204ENST00000467852 ABHD18Q0P651 414 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 ZRSR2Q15696 482 aaKnown RBP11.95□□□□□ -0.5
VPS26A-204ENST00000467852 ACCSLQ4AC99 568 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 PRR30Q53SZ7 412 aaPredicted RBP11.95□□□□□ -0.5
VPS26A-204ENST00000467852 DCAF12Q5T6F0 453 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 MMS22LQ6ZRQ5 1243 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 XYLT1Q86Y38 959 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 C12orf29Q8N999 325 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 HJURPQ8NCD3 748 aaPredicted RBP11.95□□□□□ -0.5
VPS26A-204ENST00000467852 PCDH19Q8TAB3 1148 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 ART4Q93070 314 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 HDAC11Q96DB2 347 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 MRPL44Q9H9J2 332 aaKnown RBP11.95□□□□□ -0.5
VPS26A-204ENST00000467852 DYRK4Q9NR20 520 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 SLC39A1Q9NY26 324 aa11.95□□□□□ -0.5
VPS26A-204ENST00000467852 POLEQ07864 2286 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 ANKUB1A6NFN9 424 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 MCF2LO15068 1137 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 INPP4BO15327 924 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 LRCH4O75427 683 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 DLATP10515 647 aaKnown RBP11.94□□□□□ -0.5
VPS26A-204ENST00000467852 GLB1P16278 677 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 SLC11A2P49281 568 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 PGDP52209 483 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 RPS21P63220 83 aaKnown RBP11.94□□□□□ -0.5
VPS26A-204ENST00000467852 ARHGEF7Q14155 803 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 TMEM259Q4ZIN3 620 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 BMP2KLQ5H9B9 411 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 TPRG1LQ5T0D9 272 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 RD3Q7Z3Z2 195 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 SPRED1Q7Z699 444 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 SFR1Q86XK3 245 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 RCBTB1Q8NDN9 531 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 FEM1CQ96JP0 617 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 STRA6Q9BX79 667 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 TM6SF1Q9BZW5 370 aa11.94□□□□□ -0.5
VPS26A-204ENST00000467852 TRIT1Q9H3H1 467 aaKnown RBP11.94□□□□□ -0.5
VPS26A-204ENST00000467852 OAS3Q9Y6K5 1087 aaKnown RBP11.94□□□□□ -0.5
VPS26A-204ENST00000467852 GOLGA6L7A0A1B0GV03 622 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 RAD51BO15315 384 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 CPNE6O95741 557 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 CTSEP14091 401 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 CLCN1P35523 988 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 NOP2P46087 812 aaKnown RBP11.93□□□□□ -0.5
VPS26A-204ENST00000467852 BLKP51451 505 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 PMS2P54278 862 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 RAB15P59190 212 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 PPARDQ03181 441 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 SRSF11Q05519 484 aaKnown RBP11.93□□□□□ -0.5
VPS26A-204ENST00000467852 SULT2A1Q06520 285 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 SGCGQ13326 291 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 MCM6Q14566 821 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 C14orf28Q4W4Y0 310 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 FSCBQ5H9T9 825 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 ZNF667Q5HYK9 610 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 KIAA1161Q6NSJ0 714 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 SCARA5Q6ZMJ2 495 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 GKN2Q86XP6 184 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 NRSN1Q8IZ57 195 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 APCDD1Q8J025 514 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 AGBL5Q8NDL9 886 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 RNF139Q8WU17 664 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 FRS2Q8WU20 508 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 RNF34Q969K3 372 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 CYFIP2Q96F07 1278 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 CALML4Q96GE6 196 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 TEFMQ96QE5 360 aaKnown RBP11.93□□□□□ -0.5
VPS26A-204ENST00000467852 MRPL40Q9NQ50 206 aaKnown RBP11.93□□□□□ -0.5
VPS26A-204ENST00000467852 SFMBT1Q9UHJ3 866 aa11.93□□□□□ -0.5
VPS26A-204ENST00000467852 ARHGEF17Q96PE2 2063 aaPredicted RBP11.92□□□□□ -0.5
VPS26A-204ENST00000467852 KPNA3O00505 521 aaPredicted RBP11.92□□□□□ -0.5
VPS26A-204ENST00000467852 PHACTR2O75167 634 aa11.92□□□□□ -0.5
VPS26A-204ENST00000467852 GCNT3O95395 438 aa11.92□□□□□ -0.5
VPS26A-204ENST00000467852 C8BP07358 591 aa11.92□□□□□ -0.5
VPS26A-204ENST00000467852 IDEP14735 1019 aa11.92□□□□□ -0.5
VPS26A-204ENST00000467852 CSTF2P33240 577 aaKnown RBP eCLIP11.92□□□□□ -0.5
VPS26A-204ENST00000467852 ERV3-1Q14264 604 aa11.92□□□□□ -0.5
VPS26A-204ENST00000467852 UNC93AQ86WB7 457 aa11.92□□□□□ -0.5
VPS26A-204ENST00000467852 CBWD2Q8IUF1 395 aa11.92□□□□□ -0.5
VPS26A-204ENST00000467852 UNC45BQ8IWX7 931 aa11.92□□□□□ -0.5
VPS26A-204ENST00000467852 LENG8Q96PV6 779 aaPredicted RBP11.92□□□□□ -0.5
VPS26A-204ENST00000467852 DDX50Q9BQ39 737 aaKnown RBP11.92□□□□□ -0.5
VPS26A-204ENST00000467852 XYLT2Q9H1B5 865 aa11.92□□□□□ -0.5
VPS26A-204ENST00000467852 RDH14Q9HBH5 336 aa11.92□□□□□ -0.5
VPS26A-204ENST00000467852 SLC26A4O43511 780 aa11.91□□□□□ -0.5
VPS26A-204ENST00000467852 BNIP3LO60238 219 aa11.91□□□□□ -0.5
VPS26A-204ENST00000467852 ACSL4O60488 711 aa11.91□□□□□ -0.5
VPS26A-204ENST00000467852 CELA2BP08218 269 aaPredicted RBP11.91□□□□□ -0.5
VPS26A-204ENST00000467852 P4HA1P13674 534 aa11.91□□□□□ -0.5
VPS26A-204ENST00000467852 CD99P14209 185 aa11.91□□□□□ -0.5
VPS26A-204ENST00000467852 CAPN3P20807 821 aa11.91□□□□□ -0.5
VPS26A-204ENST00000467852 PFN3P60673 137 aa11.91□□□□□ -0.5
VPS26A-204ENST00000467852 RPS24P62847 133 aaKnown RBP11.91□□□□□ -0.5
VPS26A-204ENST00000467852 TRA2AQ13595 282 aaKnown RBP eCLIP11.91□□□□□ -0.5
VPS26A-204ENST00000467852 ZNF699Q32M78 642 aa11.91□□□□□ -0.5
VPS26A-204ENST00000467852 FAM133BQ5BKY9 247 aaKnown RBP11.91□□□□□ -0.5
VPS26A-204ENST00000467852 CERCAMQ5T4B2 595 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms