RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 Q6ZSR6 202 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 PTAR1Q7Z6K3 402 aaPredicted RBP17.61■□□□□ 0.41
TRIM56-203ENST00000467847 ABI3BPQ7Z7G0 1075 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 FAM131BQ86XD5 332 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 PCDH20Q8N6Y1 951 aaKnown RBP17.61■□□□□ 0.41
TRIM56-203ENST00000467847 SNIP1Q8TAD8 396 aaKnown RBP17.61■□□□□ 0.41
TRIM56-203ENST00000467847 FAM174AQ8TBP5 190 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 FGF11Q92914 225 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 DNAJC28Q9NX36 388 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 ZNF212Q9UDV6 495 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 MAST4O15021 2626 aa17.61■□□□□ 0.41
TRIM56-203ENST00000467847 ZMPSTE24O75844 475 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 CKMT1AP12532 417 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 ITGB7P26010 798 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 ACTN2P35609 894 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 GNA12Q03113 381 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 ZNF542PQ5EBM4 170 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 CARD16Q5EG05 197 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 ARTNQ5T4W7 220 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 KIAA1161Q6NSJ0 714 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 BNIPLQ7Z465 357 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 NOP9Q86U38 636 aaKnown RBP17.6■□□□□ 0.41
TRIM56-203ENST00000467847 DCP2Q8IU60 420 aaKnown RBP17.6■□□□□ 0.41
TRIM56-203ENST00000467847 DRC7Q8IY82 874 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 CPA5Q8WXQ8 436 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 IFT43Q96FT9 208 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 HEPHQ9BQS7 1158 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 SLC17A9Q9BYT1 436 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 PRORYQ9H606 182 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 CAAP1Q9H8G2 361 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 NLGN3Q9NZ94 848 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 TMEM59LQ9UK28 342 aa17.6■□□□□ 0.41
TRIM56-203ENST00000467847 FCF1Q9Y324 198 aaKnown RBP17.6■□□□□ 0.41
TRIM56-203ENST00000467847 NEMP2A6NFY4 417 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 ATXN7O15265 892 aaPredicted RBP17.59■□□□□ 0.41
TRIM56-203ENST00000467847 GIMD1P0DJR0 217 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 PLA2G2AP14555 144 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 UCHL3P15374 230 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 L1CAMP32004 1257 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 CCNHP51946 323 aaPredicted RBP17.59■□□□□ 0.41
TRIM56-203ENST00000467847 ARF5P84085 180 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 ATP11AP98196 1134 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 TBC1D25Q3MII6 688 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 DPCR1Q3MIW9 517 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 NAA35Q5VZE5 725 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 KYAT3Q6YP21 454 aaKnown RBP17.59■□□□□ 0.41
TRIM56-203ENST00000467847 FEM1CQ96JP0 617 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 BMFQ96LC9 184 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 NAA15Q9BXJ9 866 aaKnown RBP17.59■□□□□ 0.41
TRIM56-203ENST00000467847 ZDHHC6Q9H6R6 413 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 PPARGC1AQ9UBK2 798 aaKnown RBP17.59■□□□□ 0.41
TRIM56-203ENST00000467847 RAI2Q9Y5P3 530 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 FADS3Q9Y5Q0 445 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 HS3ST3A1Q9Y663 406 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 CHD5Q8TDI0 1954 aa17.59■□□□□ 0.41
TRIM56-203ENST00000467847 POM121BA6NF01 834 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 F8VZ95 297 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 SCAMP1O15126 338 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 OPA1O60313 960 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 C1QL1O75973 258 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 PAK4O96013 591 aaPredicted RBP17.58■□□□□ 0.4
TRIM56-203ENST00000467847 MMEP08473 750 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 MYF5P13349 255 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 ERCC5P28715 1186 aaPredicted RBP17.58■□□□□ 0.4
TRIM56-203ENST00000467847 HNRNPKP61978 463 aaKnown RBP eCLIP17.58■□□□□ 0.4
TRIM56-203ENST00000467847 NOMO3P69849 1222 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 FGL2Q14314 439 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 PARS2Q7L3T8 475 aaKnown RBP17.58■□□□□ 0.4
TRIM56-203ENST00000467847 ARCQ7LC44 396 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 RYBPQ8N488 228 aaPredicted RBP17.58■□□□□ 0.4
TRIM56-203ENST00000467847 EMC1Q8N766 993 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 APOLD1Q96LR9 279 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 FCRL3Q96P31 734 aaPredicted RBP17.58■□□□□ 0.4
TRIM56-203ENST00000467847 TM6SF2Q9BZW4 377 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 CLSTN2Q9H4D0 955 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 METTL5Q9NRN9 209 aaKnown RBP17.58■□□□□ 0.4
TRIM56-203ENST00000467847 GPR27Q9NS67 375 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 EVA1BQ9NVM1 165 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 HECAQ9UBI9 543 aaPredicted RBP17.58■□□□□ 0.4
TRIM56-203ENST00000467847 DACH1Q9UI36 760 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 PCDHB1Q9Y5F3 818 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 ACTL7AQ9Y615 435 aa17.58■□□□□ 0.4
TRIM56-203ENST00000467847 K7ESM1 405 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 RAD51BO15315 384 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 AP1G1O43747 822 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 NEBLO76041 1014 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 GP1BAP07359 652 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 ETFBP38117 255 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 DUSP3P51452 185 aaPredicted RBP17.57■□□□□ 0.4
TRIM56-203ENST00000467847 CCDC173Q0VFZ6 552 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 SGCGQ13326 291 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 FZD2Q14332 565 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 CDCP2Q5VXM1 449 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 RWDD4Q6NW29 188 aaKnown RBP17.57■□□□□ 0.4
TRIM56-203ENST00000467847 PARGQ86W56 976 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 OR6K2Q8NGY2 324 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 EPS8L1Q8TE68 723 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 DEPDC7Q96QD5 511 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 DUSP23Q9BVJ7 150 aa17.57■□□□□ 0.4
TRIM56-203ENST00000467847 STK33Q9BYT3 514 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms