RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ACTN2P35609 894 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 NPTX2P47972 431 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 PPP3CCP48454 512 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 TMPRSS3P57727 454 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 TMPRSS15P98073 1019 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 MCL1Q07820 350 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 MAPRE1Q15691 268 aaKnown RBP5.76□□□□□ -1.49
PTCD3-207ENST00000467273 ZRSR2Q15696 482 aaKnown RBP5.76□□□□□ -1.49
PTCD3-207ENST00000467273 HLA-BQ31612 363 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 BROXQ5VW32 411 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 SPATA1Q5VX52 437 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 RNF219Q5W0B1 726 aaPredicted RBP5.76□□□□□ -1.49
PTCD3-207ENST00000467273 BLOC1S2Q6QNY1 142 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 PIK3AP1Q6ZUJ8 805 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 SPRED1Q7Z699 444 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 CATSPER3Q86XQ3 398 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 CD302Q8IX05 232 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 CHST14Q8NCH0 376 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 ERMNQ8TAM6 284 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 MED8Q96G25 268 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 TMEM176AQ96HP8 235 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 SENP8Q96LD8 212 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 MTMR9Q96QG7 549 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 NTPCRQ9BSD7 190 aaKnown RBP5.76□□□□□ -1.49
PTCD3-207ENST00000467273 C1QTNF3Q9BXJ4 246 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 RNF38Q9H0F5 515 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 CASS4Q9NQ75 786 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 CATSPERZQ9NTU4 200 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 EHD2Q9NZN4 543 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 TBC1D14Q9P2M4 693 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 B4GALT6Q9UBX8 382 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 DERAQ9Y315 318 aa5.76□□□□□ -1.49
PTCD3-207ENST00000467273 KNTC1P50748 2209 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 BOD1L1Q8NFC6 3051 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 ANKRD17O75179 2603 aaKnown RBP5.75□□□□□ -1.49
PTCD3-207ENST00000467273 A0A1W2PQF6 199 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 ANO9A1A5B4 782 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 FAM149AA5PLN7 773 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 H7BY64 318 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 IFRD1O00458 451 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-207ENST00000467273 HOXC11O43248 304 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-207ENST00000467273 SLC28A2O43868 658 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 CDKL5O76039 1030 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 FUCA1P04066 466 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 COL6A2P12110 1019 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 JUPP14923 745 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 CD6P30203 668 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 IL2P60568 153 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 CXADRP78310 365 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 SLC7A9P82251 487 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 PRR5P85299 388 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 TSPY1Q01534 308 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 SEMG2Q02383 582 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 GAD2Q05329 585 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 ILKQ13418 452 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 E2F5Q15329 346 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 CFAP221Q4G0U5 840 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 BTBD8Q5XKL5 378 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 HAUS3Q68CZ6 603 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 DHRS13Q6UX07 377 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 OSTM1Q86WC4 334 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 ARL14EPQ8N8R7 260 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-207ENST00000467273 ZNF248Q8NDW4 579 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 PLEKHO2Q8TD55 490 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 COG1Q8WTW3 980 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 CHTF18Q8WVB6 975 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 IGSF8Q969P0 613 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 ZNF274Q96GC6 653 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-207ENST00000467273 FUBP3Q96I24 572 aaKnown RBP eCLIP5.75□□□□□ -1.49
PTCD3-207ENST00000467273 SLC22A12Q96S37 553 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 CYP2S1Q96SQ9 504 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 GABRG3Q99928 467 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 KIFC3Q9BVG8 833 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 TIPINQ9BVW5 301 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 RSPH9Q9H1X1 276 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-207ENST00000467273 LINC00597Q9H2U6 94 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 RPF1Q9H9Y2 349 aaKnown RBP5.75□□□□□ -1.49
PTCD3-207ENST00000467273 CD248Q9HCU0 757 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 TRPC7Q9HCX4 862 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 KMT5AQ9NQR1 393 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 IL17BQ9UHF5 180 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 MAGED2Q9UNF1 606 aaPredicted RBP5.75□□□□□ -1.49
PTCD3-207ENST00000467273 ZKSCAN5Q9Y2L8 839 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 SH3BP1Q9Y3L3 701 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 PCDHB6Q9Y5E3 794 aa5.75□□□□□ -1.49
PTCD3-207ENST00000467273 LRRK2Q5S007 2527 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 E2F8A0AVK6 867 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 TBC1D3BA6NDS4 549 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 CCDC169A6NNP5 214 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 MEI4A8MW99 385 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 C22orf46C9J442 243 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 H0YCG3 227 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 LEFTY2O00292 366 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 PIRO00625 290 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 NPC1O15118 1278 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 GSTA4O15217 222 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 TIMM44O43615 452 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 MED24O75448 989 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 FKBP9O95302 570 aa5.74□□□□□ -1.49
PTCD3-207ENST00000467273 OLFM2O95897 454 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms