RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 PHF7Q9BWX1 381 aaPredicted RBP4.61□□□□□ -1.67
LRCH3-211ENST00000466054 TASP1Q9H6P5 420 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 JMJD4Q9H9V9 463 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 ZNF304Q9HCX3 659 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 UBN1Q9NPG3 1134 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 GRHL1Q9NZI5 618 aa4.61□□□□□ -1.67
LRCH3-211ENST00000466054 IFT80Q9P2H3 777 aaPredicted RBP4.61□□□□□ -1.67
LRCH3-211ENST00000466054 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.61□□□□□ -1.67
LRCH3-211ENST00000466054 TRBV5-7A0A0A0MS05 114 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 A0A0G2JK05 382 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 GAGE10A6NGK3 116 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 HNRNPA1P09651 372 aaKnown RBP eCLIP4.6□□□□□ -1.67
LRCH3-211ENST00000466054 PAX3P23760 479 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 KLRC2P26717 231 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 SLC18A3Q16572 532 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 NFIL3Q16649 462 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 TTLL5Q6EMB2 1281 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 ADGRG6Q86SQ4 1221 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 PIP4P1Q86T03 277 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 SLC25A41Q8N5S1 370 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 DPP10Q8N608 796 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 TNIP2Q8NFZ5 429 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 ZCCHC10Q8TBK6 192 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 RAB40AQ8WXH6 277 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 SEC62Q99442 399 aaKnown RBP4.6□□□□□ -1.67
LRCH3-211ENST00000466054 UNC45AQ9H3U1 944 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 MROH8Q9H579 483 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 PNRC2Q9NPJ4 139 aaKnown RBP4.6□□□□□ -1.67
LRCH3-211ENST00000466054 ENTPD7Q9NQZ7 604 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 ZDHHC7Q9NXF8 308 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 PPP1R14DQ9NXH3 145 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 HDAC6Q9UBN7 1215 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 ANAPC4Q9UJX5 808 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 HSF4Q9ULV5 492 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 SLC4A4Q9Y6R1 1079 aa4.6□□□□□ -1.67
LRCH3-211ENST00000466054 GAGE12JA6NER3 117 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 ZNF814B7Z6K7 855 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 RNMTO43148 476 aaKnown RBP4.59□□□□□ -1.67
LRCH3-211ENST00000466054 TMCC1O94876 653 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 CAMK1Q14012 370 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 NAA25Q14CX7 972 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 INPP5JQ15735 1006 aaPredicted RBP4.59□□□□□ -1.67
LRCH3-211ENST00000466054 GPR68Q15743 365 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 RPE65Q16518 533 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 ENTPD8Q5MY95 495 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 GFI1BQ5VTD9 330 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 WDR5BQ86VZ2 330 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 ZDHHC23Q8IYP9 409 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 GHDCQ8N2G8 530 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 ARFGAP1Q8N6T3 406 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 ST8SIA4Q92187 359 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 NR4A3Q92570 626 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 CNOT9Q92600 299 aaKnown RBP4.59□□□□□ -1.67
LRCH3-211ENST00000466054 EME1Q96AY2 570 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 EVI5LQ96CN4 794 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 EIF2AK1Q9BQI3 630 aaKnown RBP4.59□□□□□ -1.67
LRCH3-211ENST00000466054 CLSTN3Q9BQT9 956 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.59□□□□□ -1.67
LRCH3-211ENST00000466054 INTS2Q9H0H0 1204 aaKnown RBP4.59□□□□□ -1.67
LRCH3-211ENST00000466054 AAMDCQ9H7C9 122 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 ATP8A2Q9NTI2 1148 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 BEX4Q9NWD9 120 aaPredicted RBP4.59□□□□□ -1.67
LRCH3-211ENST00000466054 MSRB1Q9NZV6 116 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 HCN3Q9P1Z3 774 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 PCDHA12Q9UN75 941 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 CNPY2Q9Y2B0 182 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 HS3ST3B1Q9Y662 390 aa4.59□□□□□ -1.67
LRCH3-211ENST00000466054 C17orf113A0A1B0GUU1 675 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 C17orf102A2RUQ5 167 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 A6NLC8 198 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 C4orf47A7E2U8 309 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 TEX22C9J3V5 150 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 PER2O15055 1255 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 SERPINC1P01008 464 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 YWHAQP27348 245 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 DDIT3P35638 169 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 LIFRP42702 1097 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 ALDH7A1P49419 539 aaKnown RBP4.58□□□□□ -1.68
LRCH3-211ENST00000466054 TUBP50607 506 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 CLCNKBP51801 687 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 NAPEPLDQ6IQ20 393 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 TMC8Q8IU68 726 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 HSPH1Q92598 858 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 ZNF419Q96HQ0 510 aaPredicted RBP4.58□□□□□ -1.68
LRCH3-211ENST00000466054 LMAN2LQ9H0V9 348 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 EPHX3Q9H6B9 360 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 SEMA4BQ9NPR2 832 aaPredicted RBP4.58□□□□□ -1.68
LRCH3-211ENST00000466054 DECR2Q9NUI1 292 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 HEY2Q9UBP5 337 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 CYP46A1Q9Y6A2 500 aa4.58□□□□□ -1.68
LRCH3-211ENST00000466054 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.57□□□□□ -1.68
LRCH3-211ENST00000466054 PRSS47A8MTI9 375 aa4.57□□□□□ -1.68
LRCH3-211ENST00000466054 ATG13O75143 517 aa4.57□□□□□ -1.68
LRCH3-211ENST00000466054 ZC3H11AO75152 810 aaKnown RBP eCLIP4.57□□□□□ -1.68
LRCH3-211ENST00000466054 CBX6O95503 412 aa4.57□□□□□ -1.68
LRCH3-211ENST00000466054 TOMM40O96008 361 aa4.57□□□□□ -1.68
LRCH3-211ENST00000466054 ADAP00813 363 aa4.57□□□□□ -1.68
LRCH3-211ENST00000466054 IFNA2P01563 188 aa4.57□□□□□ -1.68
LRCH3-211ENST00000466054 IL1AP01583 271 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms