RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 PCDHGB2Q9Y5G2 931 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 AKAP13Q12802 2813 aa22.19■■□□□ 1.14
LIME1-203ENST00000465591 USP24Q9UPU5 2620 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 ARID1BQ8NFD5 2236 aaPredicted RBP22.18■■□□□ 1.14
LIME1-203ENST00000465591 HYAL3O43820 417 aaPredicted RBP22.18■■□□□ 1.14
LIME1-203ENST00000465591 RNGTTO60942 597 aaKnown RBP22.18■■□□□ 1.14
LIME1-203ENST00000465591 C21orf59P57076 290 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 TPM4P67936 248 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 SHBQ15464 509 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 NAPEPLDQ6IQ20 393 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 ERN2Q76MJ5 926 aaKnown RBP22.18■■□□□ 1.14
LIME1-203ENST00000465591 PRPF39Q86UA1 669 aaKnown RBP22.18■■□□□ 1.14
LIME1-203ENST00000465591 BAHD1Q8TBE0 780 aaPredicted RBP22.18■■□□□ 1.14
LIME1-203ENST00000465591 KLK6Q92876 244 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 HMCESQ96FZ2 354 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 EPAS1Q99814 870 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 HEPHQ9BQS7 1158 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 PREBQ9HCU5 417 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 IFNKQ9P0W0 207 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 PCSK1NQ9UHG2 260 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 IGF2RP11717 2491 aa22.18■■□□□ 1.14
LIME1-203ENST00000465591 CXorf51AA0A1B0GTR3 108 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 A0A1W2PQJ5 194 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 WASH4PA8MWX3 477 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 KDELR3O43731 214 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 AIF1P55008 147 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 CPLX3Q8WVH0 158 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 ISG20Q96AZ6 181 aaKnown RBP22.17■■□□□ 1.14
LIME1-203ENST00000465591 SNRNP25Q9BV90 132 aaKnown RBP22.17■■□□□ 1.14
LIME1-203ENST00000465591 SCNM1Q9BWG6 230 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 HDAC8Q9BY41 377 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 ISCUQ9H1K1 167 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 ZDHHC6Q9H6R6 413 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 MYO1AQ9UBC5 1043 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 HECAQ9UBI9 543 aaPredicted RBP22.17■■□□□ 1.14
LIME1-203ENST00000465591 TPX2Q9ULW0 747 aaKnown RBP22.17■■□□□ 1.14
LIME1-203ENST00000465591 AP4E1Q9UPM8 1137 aa22.17■■□□□ 1.14
LIME1-203ENST00000465591 ZFR2Q9UPR6 939 aaKnown RBP22.17■■□□□ 1.14
LIME1-203ENST00000465591 A0A1B0GTQ1 180 aa22.16■■□□□ 1.14
LIME1-203ENST00000465591 A0A1W2PQU0 124 aa22.16■■□□□ 1.14
LIME1-203ENST00000465591 RASA4BC9J798 803 aa22.16■■□□□ 1.14
LIME1-203ENST00000465591 GOLGA6L19H0YKK7 550 aa22.16■■□□□ 1.14
LIME1-203ENST00000465591 RASA4O43374 803 aa22.16■■□□□ 1.14
LIME1-203ENST00000465591 PRLRP16471 622 aa22.16■■□□□ 1.14
LIME1-203ENST00000465591 CCT8P50990 548 aa22.16■■□□□ 1.14
LIME1-203ENST00000465591 HNRNPDQ14103 355 aaKnown RBP22.16■■□□□ 1.14
LIME1-203ENST00000465591 TDRD12Q587J7 1177 aaKnown RBP22.16■■□□□ 1.14
LIME1-203ENST00000465591 ATXN7L2Q5T6C5 722 aaPredicted RBP22.16■■□□□ 1.14
LIME1-203ENST00000465591 PARS2Q7L3T8 475 aaKnown RBP22.16■■□□□ 1.14
LIME1-203ENST00000465591 SPATS2Q86XZ4 545 aaKnown RBP22.16■■□□□ 1.14
LIME1-203ENST00000465591 KCTD15Q96SI1 283 aaPredicted RBP22.16■■□□□ 1.14
LIME1-203ENST00000465591 DHX35Q9H5Z1 703 aaKnown RBP22.16■■□□□ 1.14
LIME1-203ENST00000465591 DYRK4Q9NR20 520 aa22.16■■□□□ 1.14
LIME1-203ENST00000465591 PCDHB9Q9Y5E1 797 aa22.16■■□□□ 1.14
LIME1-203ENST00000465591 TLR4O00206 839 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 FLRT2O43155 660 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 BUB1O43683 1085 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 PCDHGA12O60330 932 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 TMCC1O94876 653 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 GYPCP04921 128 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 FTH1P19P0C7X4 201 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 ITGB7P26010 798 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 MIPP30301 263 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 NXPH1P58417 271 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 TPI1P60174 286 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 SKOR2Q2VWA4 1001 aaPredicted RBP22.15■■□□□ 1.14
LIME1-203ENST00000465591 ZNF284Q2VY69 593 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 SEL1L3Q68CR1 1132 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 SLCO6A1Q86UG4 719 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 HORMAD1Q86X24 394 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 PLPP6Q8IY26 295 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 UMODL1-AS1Q8N2C9 162 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 CHCHD4Q8N4Q1 142 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 PNPLA1Q8N8W4 532 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 OR2AP1Q8NGE2 309 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 RHBDD1Q8TEB9 315 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 FNIP1Q8TF40 1166 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 SYN2Q92777 582 aaPredicted RBP22.15■■□□□ 1.14
LIME1-203ENST00000465591 ELF4Q99607 663 aaPredicted RBP22.15■■□□□ 1.14
LIME1-203ENST00000465591 MYOCQ99972 504 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 TMEM121BQ9BXQ6 578 aaPredicted RBP22.15■■□□□ 1.14
LIME1-203ENST00000465591 CATSPERBQ9H7T0 1116 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 KLK13Q9UKR3 277 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 HPCAL4Q9UM19 191 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 CAPN11Q9UMQ6 739 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 DMTF1Q9Y222 760 aa22.15■■□□□ 1.14
LIME1-203ENST00000465591 KMT2BQ9UMN6 2715 aaPredicted RBP22.15■■□□□ 1.14
LIME1-203ENST00000465591 TDRD6O60522 2096 aaKnown RBP22.15■■□□□ 1.14
LIME1-203ENST00000465591 PTPRBP23467 1997 aa22.14■■□□□ 1.14
LIME1-203ENST00000465591 SLC31A1O15431 190 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 LRCH4O75427 683 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 GSRP00390 522 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 ADRB3P13945 408 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 NEK3P51956 506 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 GEMIN4P57678 1058 aaKnown RBP22.14■■□□□ 1.13
LIME1-203ENST00000465591 YBEYP58557 167 aaPredicted RBP22.14■■□□□ 1.13
LIME1-203ENST00000465591 ZBED6P86452 979 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 SERINC3Q13530 473 aa22.14■■□□□ 1.13
LIME1-203ENST00000465591 SETMARQ53H47 684 aaPredicted RBP22.14■■□□□ 1.13
LIME1-203ENST00000465591 ERMARDQ5T6L9 678 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms