RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 SLC45A1Q9Y2W3 748 aa5.34□□□□□ -1.55
SMC4-205ENST00000465563 IGLV5-37A0A075B6J1 123 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 BMPR1BO00238 502 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 ACTL6BO94805 426 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 SP1P08047 785 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 SERPINA4P29622 427 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 PEX5P50542 639 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 NEK3P51956 506 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 ACSM2AQ08AH3 577 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 SNTA1Q13424 505 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 DCTN1Q14203 1278 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 CTTNQ14247 550 aaKnown RBP5.33□□□□□ -1.56
SMC4-205ENST00000465563 TTC22Q5TAA0 569 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 FAM186BQ8IYM0 893 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 SCAIQ8N9R8 606 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 CLPBQ9H078 707 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 GAREM1Q9H706 876 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 ACAD9Q9H845 621 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 CHST12Q9NRB3 414 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 UPB1Q9UBR1 384 aa5.33□□□□□ -1.56
SMC4-205ENST00000465563 A0A1B0GVM2 712 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 LGALS16A8MUM7 142 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 CAND2O75155 1236 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 CGAP01215 116 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 CKMT1AP12532 417 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 AP2B1P63010 937 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 ILF3Q12906 894 aaKnown RBP eCLIP5.32□□□□□ -1.56
SMC4-205ENST00000465563 DGAT2L7PQ6IED9 249 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 TYW3Q6IPR3 259 aaKnown RBP5.32□□□□□ -1.56
SMC4-205ENST00000465563 GGT6Q6P531 493 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 EXOC3L1Q86VI1 746 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 BRSK2Q8IWQ3 736 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 PTGR2Q8N8N7 351 aaPredicted RBP5.32□□□□□ -1.56
SMC4-205ENST00000465563 ZNF527Q8NB42 609 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 SPRY4Q9C004 299 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 ABHD16BQ9H3Z7 469 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 PRDM8Q9NQV8 689 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 TMLHEQ9NVH6 421 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 GEMIN8Q9NWZ8 242 aaKnown RBP5.32□□□□□ -1.56
SMC4-205ENST00000465563 DHDHQ9UQ10 334 aa5.32□□□□□ -1.56
SMC4-205ENST00000465563 SAA2-SAA4A0A096LPE2 208 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 A0A0U1RQJ8 604 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 TFRCP02786 760 aaKnown RBP5.31□□□□□ -1.56
SMC4-205ENST00000465563 KRT18P05783 430 aaKnown RBP5.31□□□□□ -1.56
SMC4-205ENST00000465563 CHN1P15882 459 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 YWHAQP27348 245 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 AVPR2P30518 371 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 MYBPHQ13203 477 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 MRGPRG-AS1Q2M3A8 158 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 TBC1D9BQ66K14 1250 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 KLHL17Q6TDP4 642 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 MEX3BQ6ZN04 569 aaKnown RBP5.31□□□□□ -1.56
SMC4-205ENST00000465563 CCDC117Q8IWD4 279 aaPredicted RBP5.31□□□□□ -1.56
SMC4-205ENST00000465563 SCAMP5Q8TAC9 235 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 C3orf49Q96BT1 292 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 CCDC136Q96JN2 1154 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 IL17FQ96PD4 163 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 NPFFR1Q9GZQ6 430 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 MALT1Q9UDY8 824 aa5.31□□□□□ -1.56
SMC4-205ENST00000465563 DYTNA2CJ06 578 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 MAGEA13PA6NCF6 341 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 STRNO43815 780 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 CYP21A2P08686 494 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 GPR12P47775 334 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 ADORA2A-AS1P86434 159 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 PFKFB4Q16877 469 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 POC1AQ8NBT0 407 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 EPYCQ99645 322 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 PABPC3Q9H361 631 aaKnown RBP5.3□□□□□ -1.56
SMC4-205ENST00000465563 SDF2L1Q9HCN8 221 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 GRHL1Q9NZI5 618 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 NFS1Q9Y697 457 aa5.3□□□□□ -1.56
SMC4-205ENST00000465563 A0A096LPK6 155 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 TARSL2A2RTX5 802 aaKnown RBP5.29□□□□□ -1.56
SMC4-205ENST00000465563 PRR23AA6NEV1 266 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 PNLIPRP1P54315 467 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 LRRC24Q50LG9 513 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 PGBD2Q6P3X8 592 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 SYNE3Q6ZMZ3 975 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 GALNT15Q8N3T1 639 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 ZNF114Q8NC26 417 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 GPT2Q8TD30 523 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 TBC1D22AQ8WUA7 517 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 BICD1Q96G01 975 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 MSTO1Q9BUK6 570 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 NLRC4Q9NPP4 1024 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 FBXO40Q9UH90 709 aa5.29□□□□□ -1.56
SMC4-205ENST00000465563 CHL1O00533 1208 aa5.28□□□□□ -1.56
SMC4-205ENST00000465563 CLGNO14967 610 aa5.28□□□□□ -1.56
SMC4-205ENST00000465563 PPM1GO15355 546 aaPredicted RBP5.28□□□□□ -1.56
SMC4-205ENST00000465563 MYL1P05976 194 aa5.28□□□□□ -1.56
SMC4-205ENST00000465563 ACP5P13686 325 aa5.28□□□□□ -1.56
SMC4-205ENST00000465563 DLG1Q12959 904 aa5.28□□□□□ -1.56
SMC4-205ENST00000465563 XKR9Q5GH70 373 aa5.28□□□□□ -1.56
SMC4-205ENST00000465563 NEK10Q6ZWH5 1172 aa5.28□□□□□ -1.56
SMC4-205ENST00000465563 ZNF771Q7L3S4 317 aaPredicted RBP5.28□□□□□ -1.56
SMC4-205ENST00000465563 NAGSQ8N159 534 aa5.28□□□□□ -1.56
SMC4-205ENST00000465563 FSIP1Q8NA03 581 aa5.28□□□□□ -1.56
SMC4-205ENST00000465563 SPATA20Q8TB22 786 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms