RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 MYRIPQ8NFW9 859 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 TRAPPC12Q8WVT3 735 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 OVCA2Q8WZ82 227 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 TRIM63Q969Q1 353 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 REPS1Q96D71 796 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 DAZAP1Q96EP5 407 aaKnown RBP5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 EDC3Q96F86 508 aaKnown RBP5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 CCDC17Q96LX7 622 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 SCLT1Q96NL6 688 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 TRAPPC9Q96Q05 1148 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 TMEM120AQ9BXJ8 343 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 RIOX1Q9H6W3 641 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 SEPSECSQ9HD40 501 aaKnown RBP5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 FBXO28Q9NVF7 368 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 TMEM51Q9NW97 253 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 ASIC5Q9NY37 505 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 TERF2IPQ9NYB0 399 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 DAPP1Q9UN19 280 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 INSL6Q9Y581 213 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 CEMIPQ8WUJ3 1361 aa5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 RPAP1Q9BWH6 1393 aaPredicted RBP5.55□□□□□ -1.52
CACNA1C-223ENST00000465278 UBR5O95071 2799 aaPredicted RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 TCRBV5S1A1TA0A578 114 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 FAM90A18PA6NE21 464 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 FAM90A16PA6NEW6 464 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 SRRM3A6NNA2 597 aaPredicted RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 FAM90A9PA6NNJ1 464 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 FAM90A5PA8MXJ8 464 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 NUDT3O95989 172 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 MT-CO3P00414 261 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 IGLV2-14P01704 120 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 MBPP02686 304 aaPredicted RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 FAM90A15PP0C7V4 464 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 FAM90A14PP0C7W9 464 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 NHLRC4P0CG21 123 aaPredicted RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 DHRS4L1P0CG22 281 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 CETPP11597 493 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 BMP5P22003 454 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 MMP8P22894 467 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 IGHMBP2P38935 993 aaKnown RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 RENBPP51606 427 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 POLE2P56282 527 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 RRS1Q15050 365 aaKnown RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 AWAT1Q58HT5 328 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 C16orf89Q6UX73 402 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 TRIM72Q6ZMU5 477 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 MTERF4Q7Z6M4 381 aaKnown RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 GALNT15Q8N3T1 639 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 OTUD6BQ8N6M0 293 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 HMGB4Q8WW32 186 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 C3orf49Q96BT1 292 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 HS6ST2Q96MM7 605 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 BBC3Q96PG8 261 aaPredicted RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 SNX18Q96RF0 628 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 CINPQ9BW66 212 aaPredicted RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 ELAC1Q9H777 363 aaKnown RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 PRDM8Q9NQV8 689 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 SEMA4GQ9NTN9 838 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 LUZP4Q9P127 313 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 RAB21Q9UL25 225 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 CNTN6Q9UQ52 1028 aa5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 SIPA1L3O60292 1781 aaPredicted RBP5.54□□□□□ -1.52
CACNA1C-223ENST00000465278 ZNF236Q9UL36 1845 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 TNPO2O14787 897 aaKnown RBP5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 GCATO75600 419 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 CYP2D6P10635 497 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 WT1P19544 449 aaPredicted RBP5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 KCNA5P22460 613 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 THBS4P35443 961 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 JAK3P52333 1124 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 HMGA2P52926 109 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 RAE1P78406 368 aaKnown RBP5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 CFHR3Q02985 330 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 CUL4BQ13620 913 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 MFSD13AQ14CX5 517 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 FBXO42Q6P3S6 717 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 ACSM6Q6P461 480 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 TMEM65Q6PI78 240 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 ZNF804AQ7Z570 1209 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 TRABD2AQ86V40 505 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 MOGAT3Q86VF5 341 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 ZNF354CQ86Y25 554 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 EGFL6Q8IUX8 553 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 RILPL2Q969X0 211 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 REXO5Q96IC2 774 aaKnown RBP5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 ELOVL1Q9BW60 279 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 ADGRE3Q9BY15 652 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 PRDM13Q9H4Q3 707 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 ARPP21Q9UBL0 812 aaPredicted RBP5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 FZD4Q9ULV1 537 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 SLC12A4Q9UP95 1085 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 HEMK1Q9Y5R4 338 aaPredicted RBP5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 WNT6Q9Y6F9 365 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 LAMA5O15230 3695 aa5.53□□□□□ -1.52
CACNA1C-223ENST00000465278 PTPRSQ13332 1948 aa5.52□□□□□ -1.53
CACNA1C-223ENST00000465278 ABCC4O15439 1325 aa5.52□□□□□ -1.53
CACNA1C-223ENST00000465278 ZNF521Q96K83 1311 aa5.52□□□□□ -1.53
CACNA1C-223ENST00000465278 EPOPA6NHQ4 379 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms