RNA–Protein interactions for RNA: ENST00000463809.1

CCDC144A-211, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5

Gene CCDC144A, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-211ENST00000463809 RBMXL3Q8N7X1 1067 aaKnown RBP6.51□□□□□ -1.37
CCDC144A-211ENST00000463809 SETD9Q8NE22 299 aa6.51□□□□□ -1.37
CCDC144A-211ENST00000463809 SEZ6LQ9BYH1 1024 aa6.51□□□□□ -1.37
CCDC144A-211ENST00000463809 CXorf56Q9H5V9 222 aa6.51□□□□□ -1.37
CCDC144A-211ENST00000463809 PTPRHQ9HD43 1115 aa6.51□□□□□ -1.37
CCDC144A-211ENST00000463809 CD93Q9NPY3 652 aa6.51□□□□□ -1.37
CCDC144A-211ENST00000463809 FBXO40Q9UH90 709 aa6.51□□□□□ -1.37
CCDC144A-211ENST00000463809 FEM1BQ9UK73 627 aa6.51□□□□□ -1.37
CCDC144A-211ENST00000463809 CBX6O95503 412 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 MMP3P08254 477 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 DSC1Q08554 894 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 KEAP1Q14145 624 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 TAF5Q15542 800 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 ASIC2Q16515 512 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 RPE65Q16518 533 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 CTXN3Q4LDR2 81 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 GJB7Q6PEY0 223 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 FAM83HQ6ZRV2 1179 aaPredicted RBP6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 TMC8Q8IU68 726 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 FTSJ3Q8IY81 847 aaKnown RBP6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 TMEM57Q8N5G2 664 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 RNFT2Q96EX2 444 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 GFM1Q96RP9 751 aaKnown RBP6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 ARPC5LQ9BPX5 153 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 DNAJC16Q9Y2G8 782 aa6.5□□□□□ -1.37
CCDC144A-211ENST00000463809 KIF1CO43896 1103 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 DHX16O60231 1041 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 GLUD1P00367 558 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 DHRS4L1P0CG22 281 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 YWHAQP27348 245 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 GLUD2P49448 558 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 DSCR9P59020 149 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 TDRD12Q587J7 1177 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 C8orf82Q6P1X6 216 aaPredicted RBP6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 DENND1BQ6P3S1 775 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 HERC6Q8IVU3 1022 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 RBFAQ8N0V3 343 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 OR4N2Q8NGD1 307 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 KRTAP2-2Q9BYT5 123 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 LHPPQ9H008 270 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 RASSF1Q9NS23 344 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 ATP8A2Q9NTI2 1148 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 IL36RNQ9UBH0 155 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 PROCRQ9UNN8 238 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 CLDN16Q9Y5I7 305 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 SRPRBQ9Y5M8 271 aaKnown RBP6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 CNTNAP2Q9UHC6 1331 aa6.49□□□□□ -1.37
CCDC144A-211ENST00000463809 EYA2O00167 538 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 TCEA3O75764 348 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 TGFB3P10600 412 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 RXRAP19793 462 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 HNF1BP35680 557 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 SHBQ15464 509 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 ADCK5Q3MIX3 580 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 ATG9BQ674R7 924 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 NAPEPLDQ6IQ20 393 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 NKAPQ8N5F7 415 aaKnown RBP6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 NEXN-AS1Q8NBZ9 246 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 CCT6BQ92526 530 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 ATOH1Q92858 354 aaPredicted RBP6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 TMEM18Q96B42 140 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 TBC1D20Q96BZ9 403 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 FAM84BQ96KN1 310 aaPredicted RBP6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 NOTCH4Q99466 2003 aa6.48□□□□□ -1.37
CCDC144A-211ENST00000463809 FAM157AC9JC47 383 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 PRR23D1E9PI22 279 aaPredicted RBP6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 HBP1O60381 514 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 NBNO60934 754 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 PAPSS2O95340 614 aaPredicted RBP6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 PRR23D2P0DMB1 279 aaPredicted RBP6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 NUDT6P53370 316 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 GOLGA8FQ08AF8 430 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 FBXO43Q4G163 708 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 NADSYN1Q6IA69 706 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 C18orf65Q6ZTR6 163 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 MON1BQ7L1V2 547 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 PALB2Q86YC2 1186 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 CLIP4Q8N3C7 705 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 ANKRD44Q8N8A2 993 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 CEP70Q8NHQ1 597 aa6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 NPLQ9BXD5 320 aaPredicted RBP6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 WDR6Q9NNW5 1121 aaKnown RBP6.47□□□□□ -1.37
CCDC144A-211ENST00000463809 EME2A4GXA9 379 aaPredicted RBP6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 ASAP2O43150 1006 aa6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 FGF3P11487 239 aaPredicted RBP6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 NAGAP17050 411 aa6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 GPR12P47775 334 aa6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 AMTP48728 403 aa6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 ME3Q16798 604 aa6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 CAPRIN2Q6IMN6 1127 aaKnown RBP6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 MIGA1Q8NAN2 632 aa6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 NPFFR1Q9GZQ6 430 aa6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 ITM2CQ9NQX7 267 aa6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 RRP7AQ9Y3A4 280 aaKnown RBP6.46□□□□□ -1.38
CCDC144A-211ENST00000463809 A0A096LPK6 155 aa6.45□□□□□ -1.38
CCDC144A-211ENST00000463809 PRSS44E7EML9 344 aa6.45□□□□□ -1.38
CCDC144A-211ENST00000463809 ACOT8O14734 319 aa6.45□□□□□ -1.38
CCDC144A-211ENST00000463809 IRAK2O43187 625 aa6.45□□□□□ -1.38
CCDC144A-211ENST00000463809 SERPINC1P01008 464 aa6.45□□□□□ -1.38
CCDC144A-211ENST00000463809 IL1AP01583 271 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms