RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 PPP1R2P3Q6NXS1 205 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 IRF2BP2Q7Z5L9 587 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 ZSCAN30Q86W11 494 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 TBC1D31Q96DN5 1066 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 LRIG1Q96JA1 1093 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 NAT10Q9H0A0 1025 aaKnown RBP20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 TNKS2Q9H2K2 1166 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 FTSJ1Q9UET6 329 aa20.95■□□□□ 0.94
PDLIM4-205ENST00000463615 A0A1W2PQU0 124 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 SRRM3A6NNA2 597 aaPredicted RBP20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 AP1G1O43747 822 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 ITGAVP06756 1048 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 C1SP09871 688 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 CDK4P11802 303 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 ACVRL1P37023 503 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 TMEM259Q4ZIN3 620 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 SLFN11Q7Z7L1 901 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 GATAD2AQ86YP4 633 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 GALNT15Q8N3T1 639 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 AOPEPQ8N6M6 819 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 FAM174AQ8TBP5 190 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 VCPIP1Q96JH7 1222 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 TMEM63CQ9P1W3 806 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 ZZEF1O43149 2961 aa20.94■□□□□ 0.94
PDLIM4-205ENST00000463615 DOCK9Q9BZ29 2069 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 GSRP00390 522 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 CCNHP51946 323 aaPredicted RBP20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 NEK3P51956 506 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 ACAD10Q6JQN1 1059 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 RWDD4Q6NW29 188 aaKnown RBP20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 DNAJC24Q6P3W2 148 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 PROSER1Q86XN7 944 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 MCOLN2Q8IZK6 566 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 GRIN3AQ8TCU5 1115 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 BAP1Q92560 729 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 VOPP1Q96AW1 172 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 KLHDC7BQ96G42 594 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 MAGEB5Q9BZ81 275 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 RTN4Q9NQC3 1192 aaKnown RBP20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 DKK4Q9UBT3 224 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 ZFR2Q9UPR6 939 aaKnown RBP20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 FCF1Q9Y324 198 aaKnown RBP20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 CFAP47Q6ZTR5 3102 aa20.93■□□□□ 0.94
PDLIM4-205ENST00000463615 ARID1BQ8NFD5 2236 aaPredicted RBP20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 FAM208BQ5VWN6 2430 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 ZSCAN5CA6NGD5 496 aaPredicted RBP20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 WASH4PA8MWX3 477 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 CCP110O43303 1012 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 RAMP2O60895 175 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 ADRB3P13945 408 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 HNRNPA2B1P22626 353 aaKnown RBP20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 KIAA1161Q6NSJ0 714 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 ABI3BPQ7Z7G0 1075 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 RTL3Q8N8U3 475 aaKnown RBP20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 CASKIN2Q8WXE0 1202 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 TSC1Q92574 1164 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 CNPY3Q9BT09 278 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 DNAI1Q9UI46 699 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 HPCAL4Q9UM19 191 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 FADS3Q9Y5Q0 445 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 WDFY3Q8IZQ1 3526 aa20.92■□□□□ 0.94
PDLIM4-205ENST00000463615 ANKRD62A6NC57 917 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 TAF4O00268 1085 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 ENC1O14682 589 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 TEX33O43247 280 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 KDELR3O43731 214 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 LDOC1O95751 146 aaPredicted RBP20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 AKT2P31751 481 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 YBEYP58557 167 aaPredicted RBP20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 RPL7AP62424 266 aaKnown RBP20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 BNIP3Q12983 259 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 POLD3Q15054 466 aaPredicted RBP20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 ANO6Q4KMQ2 910 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 EFHC2Q5JST6 749 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 ANKRD11Q6UB99 2663 aaPredicted RBP20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 OR2AP1Q8NGE2 309 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 RAB7BQ96AH8 199 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 IFT43Q96FT9 208 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 CNDP2Q96KP4 475 aaKnown RBP20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 MCEEQ96PE7 176 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 NOL6Q9H6R4 1146 aaKnown RBP20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 GPR27Q9NS67 375 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 SEPT11Q9NVA2 429 aaKnown RBP20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 KLHL11Q9NVR0 708 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 HECAQ9UBI9 543 aaPredicted RBP20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 FZD10Q9ULW2 581 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 HS3ST3A1Q9Y663 406 aa20.91■□□□□ 0.94
PDLIM4-205ENST00000463615 A0A1W2PQC6 194 aa20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 SMTNL1A8MU46 457 aa20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 SLC31A1O15431 190 aa20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 HTR7P34969 479 aa20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 RPS21P63220 83 aaKnown RBP20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 CAMK2BQ13554 666 aa20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 INO80DQ53TQ3 878 aaPredicted RBP20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 TMPRSS12Q86WS5 348 aa20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 ASB12Q8WXK4 309 aa20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 FEM1CQ96JP0 617 aa20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 CA5BQ9Y2D0 317 aa20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 ACTL7AQ9Y615 435 aa20.9■□□□□ 0.94
PDLIM4-205ENST00000463615 DMXL2Q8TDJ6 3036 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 239.6 ms