RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 PTPN20Q4JDL3 420 aa21.18■□□□□ 0.98
CPSF7-209ENST00000463244 KIAA1161Q6NSJ0 714 aa21.18■□□□□ 0.98
CPSF7-209ENST00000463244 ZCCHC8Q6NZY4 707 aaKnown RBP21.18■□□□□ 0.98
CPSF7-209ENST00000463244 IGF2-ASQ6U949 168 aa21.18■□□□□ 0.98
CPSF7-209ENST00000463244 NPY6RQ99463 290 aa21.18■□□□□ 0.98
CPSF7-209ENST00000463244 DPH1Q9BZG8 443 aa21.18■□□□□ 0.98
CPSF7-209ENST00000463244 THSD1Q9NS62 852 aa21.18■□□□□ 0.98
CPSF7-209ENST00000463244 SNX10Q9Y5X0 201 aa21.18■□□□□ 0.98
CPSF7-209ENST00000463244 SPTY2D1-AS1A0A0U1RR47 76 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 J3QKU1 62 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 KLK10O43240 276 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 CSF2P04141 144 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 TFE3P19532 575 aaPredicted RBP21.17■□□□□ 0.98
CPSF7-209ENST00000463244 SLC9A1P19634 815 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 TGM2P21980 687 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 NEK3P51956 506 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 SNX16P57768 344 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 APBA1Q02410 837 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 MAPK8IP2Q13387 824 aaPredicted RBP21.17■□□□□ 0.98
CPSF7-209ENST00000463244 TFAP2DQ7Z6R9 452 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 PARGQ86W56 976 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 SNRNP27Q8WVK2 155 aaKnown RBP21.17■□□□□ 0.98
CPSF7-209ENST00000463244 NT5C3BQ969T7 300 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 VCPIP1Q96JH7 1222 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 MPP6Q9NZW5 540 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 SSUH2Q9Y2M2 353 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 CSNK1G3Q9Y6M4 447 aa21.17■□□□□ 0.98
CPSF7-209ENST00000463244 HECTD1Q9ULT8 2610 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 IGLV3-10A0A075B6K4 115 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 A0A1W2PNU3 283 aaPredicted RBP21.16■□□□□ 0.98
CPSF7-209ENST00000463244 BIN1O00499 593 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 RAD51BO15315 384 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 ENDOD1O94919 500 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 PAK4O96013 591 aaPredicted RBP21.16■□□□□ 0.98
CPSF7-209ENST00000463244 ADRB3P13945 408 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 ITGB7P26010 798 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 LRRC31Q6UY01 552 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 ZDHHC17Q8IUH5 632 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 OR7D4Q8NG98 312 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 GRAMD1AQ96CP6 724 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 PGAP3Q96FM1 320 aaPredicted RBP21.16■□□□□ 0.98
CPSF7-209ENST00000463244 FEM1CQ96JP0 617 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 C1orf74Q96LT6 269 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 SYNCQ9H7C4 482 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.16■□□□□ 0.985e-9■■□□□ 12.4
CPSF7-209ENST00000463244 NCKIPSDQ9NZQ3 722 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 KLF15Q9UIH9 416 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 STAP1Q9ULZ2 295 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 SATB2Q9UPW6 733 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 FADS3Q9Y5Q0 445 aa21.16■□□□□ 0.98
CPSF7-209ENST00000463244 AHCTF1Q8WYP5 2266 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 H3BM21 787 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 RIOK3O14730 519 aaKnown RBP21.15■□□□□ 0.98
CPSF7-209ENST00000463244 AP1G1O43747 822 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 FGFR1OPO95684 399 aaKnown RBP21.15■□□□□ 0.98
CPSF7-209ENST00000463244 OR1E1P30953 314 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 L1CAMP32004 1257 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 RABIFP47224 123 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 SULT1E1P49888 294 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 SERPINH1P50454 418 aaKnown RBP21.15■□□□□ 0.98
CPSF7-209ENST00000463244 PTK2Q05397 1052 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 CDKN3Q16667 212 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 C3orf38Q5JPI3 329 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 ARTNQ5T4W7 220 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 SMYD5Q6GMV2 418 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 GUSBP11Q6P575 273 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 TTC9Q92623 222 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 SEMA4CQ9C0C4 833 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 CEP44Q9C0F1 390 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 ZNF212Q9UDV6 495 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 PAXBP1Q9Y5B6 917 aa21.15■□□□□ 0.98
CPSF7-209ENST00000463244 ILVBLA1L0T0 632 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 AQP9O43315 295 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 ZMPSTE24O75844 475 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 F9P00740 461 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 KRT9P35527 623 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 SKOR1P84550 965 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 VAC14Q08AM6 782 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 EXOC3L4Q17RC7 722 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 TPRG1LQ5T0D9 272 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 ACBD5Q5T8D3 534 aaPredicted RBP21.14■□□□□ 0.97
CPSF7-209ENST00000463244 RETSATQ6NUM9 610 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 ZNF783Q6ZMS7 281 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 GBP6Q6ZN66 633 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 EFL1Q7Z2Z2 1120 aaKnown RBP21.14■□□□□ 0.97
CPSF7-209ENST00000463244 ZSCAN30Q86W11 494 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 PCDH20Q8N6Y1 951 aaKnown RBP21.14■□□□□ 0.97
CPSF7-209ENST00000463244 ATXN7L3BQ96GX2 97 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 SLC46A1Q96NT5 459 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 LENG8Q96PV6 779 aaPredicted RBP21.14■□□□□ 0.97
CPSF7-209ENST00000463244 KLF6Q99612 283 aaPredicted RBP21.14■□□□□ 0.97
CPSF7-209ENST00000463244 HEPHQ9BQS7 1158 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 TMPRSS4Q9NRS4 437 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 SALL4Q9UJQ4 1053 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 ENTPD2Q9Y5L3 495 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 CHD5Q8TDI0 1954 aa21.14■□□□□ 0.97
CPSF7-209ENST00000463244 CPED1A4D0V7 1026 aa21.13■□□□□ 0.97
CPSF7-209ENST00000463244 EME2A4GXA9 379 aaPredicted RBP21.13■□□□□ 0.97
CPSF7-209ENST00000463244 SPINT1O43278 529 aa21.13■□□□□ 0.97
CPSF7-209ENST00000463244 PON1P27169 355 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms