RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 NEK3P51956 506 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 PCBP4P57723 403 aaKnown RBP20.19■□□□□ 0.82
VARS-221ENST00000463184 CXADRP78310 365 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 SLC25A52Q3SY17 297 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 TFAP2DQ7Z6R9 452 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 TMEM35BQ8NCS4 154 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 BMFQ96LC9 184 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 CEP44Q9C0F1 390 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 ABCG4Q9H172 646 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 PLCB1Q9NQ66 1216 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 GPR27Q9NS67 375 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 DNAJC28Q9NX36 388 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 SNX10Q9Y5X0 201 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 WASF2Q9Y6W5 498 aa20.19■□□□□ 0.82
VARS-221ENST00000463184 K7ESM1 405 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 ZNF821O75541 412 aaPredicted RBP20.18■□□□□ 0.82
VARS-221ENST00000463184 DXOO77932 396 aaKnown RBP20.18■□□□□ 0.82
VARS-221ENST00000463184 ITGB7P26010 798 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 GABRB2P47870 512 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 LSSP48449 732 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 STX1AQ16623 288 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 KYAT3Q6YP21 454 aaKnown RBP20.18■□□□□ 0.82
VARS-221ENST00000463184 PTAR1Q7Z6K3 402 aaPredicted RBP20.18■□□□□ 0.82
VARS-221ENST00000463184 ZSCAN30Q86W11 494 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 PCDH20Q8N6Y1 951 aaKnown RBP20.18■□□□□ 0.82
VARS-221ENST00000463184 OR7D4Q8NG98 312 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 C18orf8Q96DM3 657 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 HIC2Q96JB3 615 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 HAPLN3Q96S86 360 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 TBCBQ99426 244 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 HEPHQ9BQS7 1158 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 PDCL3Q9H2J4 239 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 SIX2Q9NPC8 291 aa20.18■□□□□ 0.82
VARS-221ENST00000463184 AJAP1Q9UKB5 411 aaPredicted RBP20.18■□□□□ 0.82
VARS-221ENST00000463184 TRPM6Q9BX84 2022 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 LY6G6EA0A0G2JKS1 128 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 RIOK3O14730 519 aaKnown RBP20.17■□□□□ 0.82
VARS-221ENST00000463184 AP1G1O43747 822 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 SRGAP2O75044 1071 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 USP12O75317 370 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 ENDOD1O94919 500 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 PAK4O96013 591 aaPredicted RBP20.17■□□□□ 0.82
VARS-221ENST00000463184 CSF2P04141 144 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 MPOP05164 745 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 ADRB3P13945 408 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 L1CAMP32004 1257 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 CDH5P33151 784 aaPredicted RBP20.17■□□□□ 0.82
VARS-221ENST00000463184 SERPINH1P50454 418 aaKnown RBP20.17■□□□□ 0.82
VARS-221ENST00000463184 UCNP55089 124 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 ERVPABLB-1P60509 514 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 GABREP78334 506 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 MAPK8IP2Q13387 824 aaPredicted RBP20.17■□□□□ 0.82
VARS-221ENST00000463184 FZD2Q14332 565 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 ZNF542PQ5EBM4 170 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 CARD16Q5EG05 197 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 BROXQ5VW32 411 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 IRF2BP1Q8IU81 584 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 FAM71AQ8IYT1 594 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 SPON2Q9BUD6 331 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 POLR1BQ9H9Y6 1135 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 FADS3Q9Y5Q0 445 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 CSNK1G3Q9Y6M4 447 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 U3KQA8 63 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 KALRNO60229 2985 aa20.17■□□□□ 0.82
VARS-221ENST00000463184 SPTY2D1-AS1A0A0U1RR47 76 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 POM121BA6NF01 834 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 CAPN8A6NHC0 703 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 H3BM21 787 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 CSO75390 466 aaKnown RBP20.16■□□□□ 0.82
VARS-221ENST00000463184 ZMPSTE24O75844 475 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 MYF5P13349 255 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 NME1P15531 152 aaKnown RBP20.16■□□□□ 0.82
VARS-221ENST00000463184 MTIF2P46199 727 aaKnown RBP20.16■□□□□ 0.82
VARS-221ENST00000463184 RABIFP47224 123 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 TYRO3Q06418 890 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 FGL2Q14314 439 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 FAM102AQ5T9C2 384 aaPredicted RBP20.16■□□□□ 0.82
VARS-221ENST00000463184 ZCCHC8Q6NZY4 707 aaKnown RBP20.16■□□□□ 0.82
VARS-221ENST00000463184 PARGQ86W56 976 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 LENG8Q96PV6 779 aaPredicted RBP20.16■□□□□ 0.82
VARS-221ENST00000463184 ZYG11BQ9C0D3 744 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 OSBPL2Q9H1P3 480 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 CAAP1Q9H8G2 361 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 ATP13A1Q9HD20 1204 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 TMPRSS4Q9NRS4 437 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 NCKIPSDQ9NZQ3 722 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 ZNF212Q9UDV6 495 aa20.16■□□□□ 0.82
VARS-221ENST00000463184 CXorf51AA0A1B0GTR3 108 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 ERVH48-1M5A8F1 160 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 LZTS3O60299 673 aaPredicted RBP20.15■□□□□ 0.82
VARS-221ENST00000463184 NEBLO76041 1014 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 PNMA6AP0CW24 399 aaPredicted RBP20.15■□□□□ 0.82
VARS-221ENST00000463184 DNA2P51530 1060 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 SGCGQ13326 291 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 TPD52L1Q16890 204 aaPredicted RBP20.15■□□□□ 0.82
VARS-221ENST00000463184 ARTNQ5T4W7 220 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 ZNF605Q86T29 641 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 XYLT1Q86Y38 959 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 PLPP6Q8IY26 295 aa20.15■□□□□ 0.82
VARS-221ENST00000463184 ZNF843Q8N446 348 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms