RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 FTSJ1Q9UET6 329 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 ADAM21Q9UKJ8 722 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 CDH9Q9ULB4 789 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 PCDHGA1Q9Y5H4 931 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 MRFAP1Q9Y605 127 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 ANAPC1Q9H1A4 1944 aa6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 TLN1Q9Y490 2541 aaKnown RBP6.2□□□□□ -1.42
SMARCC1-204ENST00000462198 TBC1D3BA6NDS4 549 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 LRRC10BA6NIK2 292 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 MEI4A8MW99 385 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 LIN7AO14910 233 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 PDPK1O15530 556 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 KLK10O43240 276 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ZSCAN12O43309 604 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 OPA1O60313 960 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ATP2C2O75185 946 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 RTN3O95197 1032 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 C1SP09871 688 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 KRT5P13647 590 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 EZRP15311 586 aaKnown RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 PTPN1P18031 435 aaKnown RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 POU3F2P20265 443 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 MSX1P28360 303 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 GRIA2P42262 883 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 CTSOP43234 321 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 CSNK1EP49674 416 aaKnown RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 NDST1P52848 882 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 MFAP3P55082 362 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 UBASH3AP57075 661 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 CYP27A1Q02318 531 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 GCNT1Q02742 428 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 INCA1Q0VD86 236 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 SMARCB1Q12824 385 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 POU4F2Q12837 409 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 RAPGEF1Q13905 1077 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 MAPRE1Q15691 268 aaKnown RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 NFE2Q16621 373 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ARHGAP44Q17R89 818 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 SLC39A12Q504Y0 691 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ARSJQ5FYB0 599 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 MDH1BQ5I0G3 518 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 HES3Q5TGS1 186 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 GJB7Q6PEY0 223 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 TMEM270Q6UE05 265 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 C4orf50Q6ZRC1 276 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ENOSF1Q7L5Y1 443 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 SPATA21Q7Z572 469 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ACOT1Q86TX2 421 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 LRRTM3Q86VH5 581 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 UNC93AQ86WB7 457 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 SPATA2LQ8IUW3 424 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 VSTM4Q8IW00 320 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ARHGEF19Q8IW93 802 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 CACTIN-AS1Q8N1I8 211 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 VWA5B2Q8N398 1253 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 GBP7Q8N8V2 638 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 B3GALNT2Q8NCR0 500 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 MYCBPAPQ8TBZ2 947 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 SH3RF2Q8TEC5 729 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 C2orf15Q8WU43 125 aaKnown RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 BHMTQ93088 406 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 LIN37Q96GY3 246 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ARPC5LQ9BPX5 153 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 CARD6Q9BX69 1037 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 DPEP3Q9H4B8 488 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 TRPC7Q9HCX4 862 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ARFGAP3Q9NP61 516 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 CD93Q9NPY3 652 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ARHGEF4Q9NR80 690 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ENAMQ9NRM1 1142 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 CISHQ9NSE2 258 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 FAM207AQ9NSI2 230 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ACTR10Q9NZ32 417 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 IFNKQ9P0W0 207 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 HMGXB4Q9UGU5 601 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 DNAJC12Q9UKB3 198 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 GTF3C4Q9UKN8 822 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 MAGED2Q9UNF1 606 aaPredicted RBP6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 MAN2B2Q9Y2E5 1009 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 NME7Q9Y5B8 376 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 PCDHB5Q9Y5E4 795 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 PCDHB4Q9Y5E5 795 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 SNX11Q9Y5W9 270 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 ATP8B3O60423 1300 aa6.19□□□□□ -1.42
SMARCC1-204ENST00000462198 TRAV19A0A0A6YYK7 116 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 A0A1W2PQF6 199 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 FAM221AA4D161 298 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 METTL12A8MUP2 240 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 H3BQF6 201 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 CBX4O00257 560 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 ZSCAN9O15535 394 aaPredicted RBP6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 TPD52L2O43399 206 aaKnown RBP6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 CBFA2T2O43439 604 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 PCDHGA12O60330 932 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 MMP20O60882 483 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 E2F6O75461 281 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 RFPL3O75679 317 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 LDOC1O95751 146 aaPredicted RBP6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 CKMP06732 381 aa6.18□□□□□ -1.42
SMARCC1-204ENST00000462198 FESP07332 822 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms