RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.07□□□□□ -1.76
CLK1-206ENST00000461326 NEK9Q8TD19 979 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 FAR1Q8WVX9 515 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 RPL36ALQ969Q0 106 aaKnown RBP4.07□□□□□ -1.76
CLK1-206ENST00000461326 FAM118BQ9BPY3 351 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 EFHD1Q9BUP0 239 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 TM2D2Q9BX73 214 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 SEMA4CQ9C0C4 833 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 MUC13Q9H3R2 512 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 ACTR5Q9H9F9 607 aaPredicted RBP4.07□□□□□ -1.76
CLK1-206ENST00000461326 RNF146Q9NTX7 359 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 HDAC6Q9UBN7 1215 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 NAALADL1Q9UQQ1 740 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 RABGAP1Q9Y3P9 1069 aa4.07□□□□□ -1.76
CLK1-206ENST00000461326 ZNF521Q96K83 1311 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 ARHGAP10A1A4S6 786 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 EIF5BO60841 1220 aaKnown RBP4.06□□□□□ -1.76
CLK1-206ENST00000461326 NFATC1O95644 943 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 DDAH2O95865 285 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 ADAP00813 363 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 IRF1P10914 325 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 YWHAQP27348 245 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 CERS1P27544 350 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 POU1F1P28069 291 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 FMO4P31512 558 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 CCKBRP32239 447 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 GABRB2P47870 512 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 HARS2P49590 506 aaKnown RBP4.06□□□□□ -1.76
CLK1-206ENST00000461326 DRG2P55039 364 aaKnown RBP4.06□□□□□ -1.76
CLK1-206ENST00000461326 SSBP2P81877 361 aaPredicted RBP4.06□□□□□ -1.76
CLK1-206ENST00000461326 NEXNQ0ZGT2 675 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 TDGQ13569 410 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 TBCEQ15813 527 aaPredicted RBP4.06□□□□□ -1.76
CLK1-206ENST00000461326 EDRF1Q3B7T1 1238 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 MEX3CQ5U5Q3 659 aaKnown RBP4.06□□□□□ -1.76
CLK1-206ENST00000461326 NCAPH2Q6IBW4 605 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 NAPEPLDQ6IQ20 393 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 KLHL24Q6TFL4 600 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 ZNF517Q6ZMY9 492 aaPredicted RBP4.06□□□□□ -1.76
CLK1-206ENST00000461326 PRSS45Q7RTY3 260 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 PXKQ7Z7A4 578 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 NME8Q8N427 588 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 WIPF2Q8TF74 440 aaPredicted RBP4.06□□□□□ -1.76
CLK1-206ENST00000461326 TMEM170AQ8WVE7 144 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 MAP4K1Q92918 833 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 FAM149B1Q96BN6 582 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 WACQ9BTA9 647 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 BRF2Q9HAW0 419 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 PAPOLBQ9NRJ5 636 aaKnown RBP4.06□□□□□ -1.76
CLK1-206ENST00000461326 ATP8A2Q9NTI2 1148 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 ZDHHC7Q9NXF8 308 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 KIAA1456Q9P272 454 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 PEMTQ9UBM1 199 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 CDH22Q9UJ99 828 aa4.06□□□□□ -1.76
CLK1-206ENST00000461326 MST1RQ04912 1400 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 AOX1Q06278 1338 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 A0A1W2PQM1 296 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 TCRBV7S3A2A0A539 114 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 SLC22A23A1A5C7 686 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 NPIPB15A6NHN6 443 aaPredicted RBP4.05□□□□□ -1.76
CLK1-206ENST00000461326 F8W810 466 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 GTPBP1O00178 669 aaKnown RBP4.05□□□□□ -1.76
CLK1-206ENST00000461326 RNMTO43148 476 aaKnown RBP4.05□□□□□ -1.76
CLK1-206ENST00000461326 TIPRLO75663 272 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 IL1AP01583 271 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 HOXB5P09067 269 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 PRR35P0CG20 571 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 ZNF8P17098 575 aaPredicted RBP4.05□□□□□ -1.76
CLK1-206ENST00000461326 CPOXP36551 454 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 CTCFP49711 727 aaPredicted RBP4.05□□□□□ -1.76
CLK1-206ENST00000461326 CLCNKBP51801 687 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 RPS13P62277 151 aaKnown RBP4.05□□□□□ -1.76
CLK1-206ENST00000461326 ZBTB16Q05516 673 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 GOLGA8DPQ0D2H9 430 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 MEA1Q16626 185 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 SLC9C1Q4G0N8 1177 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 ALG10Q5BKT4 473 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 ALG10BQ5I7T1 473 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 TTC39AQ5SRH9 613 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 SNX30Q5VWJ9 437 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 ATG9BQ674R7 924 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 ZNF626Q68DY1 528 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 FAM57BQ71RH2 274 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 TADA2BQ86TJ2 420 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 WDR5BQ86VZ2 330 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 TMC8Q8IU68 726 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 ARL14EPQ8N8R7 260 aaPredicted RBP4.05□□□□□ -1.76
CLK1-206ENST00000461326 ZNF48Q96MX3 618 aaPredicted RBP4.05□□□□□ -1.76
CLK1-206ENST00000461326 CCDC68Q9H2F9 335 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 TTYH1Q9H313 450 aaPredicted RBP4.05□□□□□ -1.76
CLK1-206ENST00000461326 SYNCQ9H7C4 482 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 PRKRIP1Q9H875 184 aaPredicted RBP4.05□□□□□ -1.76
CLK1-206ENST00000461326 NRIP3Q9NQ35 241 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 ICKQ9UPZ9 632 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.05□□□□□ -1.76
CLK1-206ENST00000461326 LYVE1Q9Y5Y7 322 aa4.05□□□□□ -1.76
CLK1-206ENST00000461326 C17orf102A2RUQ5 167 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 CXorf65A6NEN9 183 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 C2CD4BA6NLJ0 364 aa4.04□□□□□ -1.76
CLK1-206ENST00000461326 PRSS47A8MTI9 375 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms