RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CBWD5Q5RIA9 395 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 MANEAQ5SRI9 462 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 SYPL2Q5VXT5 272 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 ESRP1Q6NXG1 681 aaKnown RBP17.6■□□□□ 0.41
TOP3A-202ENST00000461127 PRMT1Q99873 361 aaKnown RBP17.6■□□□□ 0.41
TOP3A-202ENST00000461127 MUC3BQ9H195 1237 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 SLC25A18Q9H1K4 315 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 HS3ST2Q9Y278 367 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 PCDHB4Q9Y5E5 795 aa17.6■□□□□ 0.41
TOP3A-202ENST00000461127 NOBOXO60393 691 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 PAK4O96013 591 aaPredicted RBP17.59■□□□□ 0.41
TOP3A-202ENST00000461127 ANXA6P08133 673 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 JMJD7P0C870 316 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 SRCP12931 536 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 BRD2P25440 801 aaKnown RBP17.59■□□□□ 0.41
TOP3A-202ENST00000461127 RECQLP46063 649 aaPredicted RBP17.59■□□□□ 0.41
TOP3A-202ENST00000461127 LRMPQ12912 555 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 SGCGQ13326 291 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 SASS6Q6UVJ0 657 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 RBM43Q6ZSC3 357 aaKnown RBP17.59■□□□□ 0.41
TOP3A-202ENST00000461127 ZSCAN30Q86W11 494 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 SLC35F3Q8IY50 421 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 UBR7Q8N806 425 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 OR2A12Q8NGT7 310 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 C2orf49Q9BVC5 232 aaPredicted RBP17.59■□□□□ 0.41
TOP3A-202ENST00000461127 POPDC2Q9HBU9 364 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 KIAA1468Q9P260 1216 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 APOBEC3BQ9UH17 382 aaKnown RBP17.59■□□□□ 0.41
TOP3A-202ENST00000461127 KLF15Q9UIH9 416 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 PADI4Q9UM07 663 aa17.59■□□□□ 0.41
TOP3A-202ENST00000461127 LMO7DNF2Z398 122 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 CCR1P32246 355 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 NEK3P51956 506 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 CENPCQ03188 943 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 DPYDQ12882 1025 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 MTA1Q13330 715 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 TBR1Q16650 682 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 ZCWPW2Q504Y3 356 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 PRRT3Q5FWE3 981 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 ARSIQ5FYB1 569 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 FBXL22Q6P050 247 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 GRIN3AQ8TCU5 1115 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 GFM1Q96RP9 751 aaKnown RBP17.58■□□□□ 0.4
TOP3A-202ENST00000461127 FAM204AQ9H8W3 233 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 RMND1Q9NWS8 449 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 GEMIN8Q9NWZ8 242 aaKnown RBP17.58■□□□□ 0.4
TOP3A-202ENST00000461127 IL36AQ9UHA7 158 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 PCDHB11Q9Y5F2 797 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 PCDHGA4Q9Y5G9 962 aa17.58■□□□□ 0.4
TOP3A-202ENST00000461127 NOTCH2Q04721 2471 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 NTN3O00634 580 aaPredicted RBP17.57■□□□□ 0.4
TOP3A-202ENST00000461127 NVLO15381 856 aaKnown RBP17.57■□□□□ 0.4
TOP3A-202ENST00000461127 CLDN11O75508 207 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 IGLV3-25P01717 112 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 THOP1P52888 689 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 ADKP55263 362 aaKnown RBP17.57■□□□□ 0.4
TOP3A-202ENST00000461127 YWHAZP63104 245 aaKnown RBP17.57■□□□□ 0.4
TOP3A-202ENST00000461127 SRSF6Q13247 344 aaKnown RBP17.57■□□□□ 0.4
TOP3A-202ENST00000461127 SERINC3Q13530 473 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 PTK2BQ14289 1009 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 TMEM74Q96NL1 305 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 SLC13A1Q9BZW2 595 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 VANGL2Q9ULK5 521 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 OR51B4Q9Y5P0 310 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 MYO9AB2RTY4 2548 aa17.57■□□□□ 0.4
TOP3A-202ENST00000461127 BSNQ9UPA5 3926 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 NBASA2RRP1 2371 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 BIN1O00499 593 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 RAD51BO15315 384 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 MT-CO1P00395 513 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 CR2P20023 1033 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 NOS2P35228 1153 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 CLCN6P51797 869 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 CDK17Q00537 523 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 C1orf61Q13536 156 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 AUHQ13825 339 aaKnown RBP17.56■□□□□ 0.4
TOP3A-202ENST00000461127 FGL2Q14314 439 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 B3GNT8Q7Z7M8 397 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 RBFAQ8N0V3 343 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 OR52K2Q8NGK3 314 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 SCG3Q8WXD2 468 aaKnown RBP17.56■□□□□ 0.4
TOP3A-202ENST00000461127 TBATAQ96M53 351 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 NT5C1BQ96P26 610 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 LENG8Q96PV6 779 aaPredicted RBP17.56■□□□□ 0.4
TOP3A-202ENST00000461127 GSDMAQ96QA5 445 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 MED15Q96RN5 788 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 ZSWIM1Q9BR11 485 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 ADNPQ9H2P0 1102 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 PISDQ9UG56 409 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 DOLKQ9UPQ8 538 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 TBC1D30Q9Y2I9 924 aa17.56■□□□□ 0.4
TOP3A-202ENST00000461127 SYNJ2BP-COX16A0A087WUM0 186 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 D6RAR5 112 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 M0QYT0 321 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 SPINT1O43278 529 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 AP1G1O43747 822 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 GCATO75600 419 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 LEFTY1O75610 366 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 ADRB3P13945 408 aa17.55■□□□□ 0.4
TOP3A-202ENST00000461127 RRM1P23921 792 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms