RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 LSMEM2Q8N112 164 aa14□□□□□ -0.17
SCAMP4-206ENST00000460767 CCAR2Q8N163 923 aaKnown RBP14□□□□□ -0.17
SCAMP4-206ENST00000460767 CFAP52Q8N1V2 620 aa14□□□□□ -0.17
SCAMP4-206ENST00000460767 ARFGAP1Q8N6T3 406 aa14□□□□□ -0.17
SCAMP4-206ENST00000460767 OR52K2Q8NGK3 314 aa14□□□□□ -0.17
SCAMP4-206ENST00000460767 OR2T34Q8NGX1 318 aa14□□□□□ -0.17
SCAMP4-206ENST00000460767 CYB5D2Q8WUJ1 264 aa14□□□□□ -0.17
SCAMP4-206ENST00000460767 TTC9Q92623 222 aa14□□□□□ -0.17
SCAMP4-206ENST00000460767 LGMNQ99538 433 aa14□□□□□ -0.17
SCAMP4-206ENST00000460767 SLC12A6Q9UHW9 1150 aa14□□□□□ -0.17
SCAMP4-206ENST00000460767 PAXBP1Q9Y5B6 917 aa14□□□□□ -0.17
SCAMP4-206ENST00000460767 TMEM191CA6NGB0 347 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 LRRC72A6NJI9 287 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 F5H5T6 163 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 ARHGAP6O43182 974 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 LATO43561 262 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 LZTS3O60299 673 aaPredicted RBP13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 GPD1P21695 349 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 SDC4P31431 198 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 ADRA1BP35368 520 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 ERVPABLB-1P60509 514 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 ATP11AP98196 1134 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 CCDC173Q0VFZ6 552 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 OVGP1Q12889 678 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 PROX2Q3B8N5 592 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 SLC45A4Q5BKX6 768 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 BROXQ5VW32 411 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 MBLAC2Q68D91 279 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 DNAJC24Q6P3W2 148 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 NCEH1Q6PIU2 408 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 IGF2-ASQ6U949 168 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 CYP4V2Q6ZWL3 525 aaPredicted RBP13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 FAM131BQ86XD5 332 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 MFN1Q8IWA4 741 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 ZNF366Q8N895 744 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 FAM131CQ96AQ9 280 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 MRGPRX3Q96LB0 322 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 CNPY3Q9BT09 278 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 OSBPL2Q9H1P3 480 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 PARVAQ9NVD7 372 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 FBXL12Q9NXK8 326 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 VANGL2Q9ULK5 521 aa13.99□□□□□ -0.17
SCAMP4-206ENST00000460767 SYNJ2BP-COX16A0A087WUM0 186 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 SSU72P8A0A1W2PR75 194 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 CCP110O43303 1012 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 MFAP3LO75121 409 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 ASLP04424 464 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 MYBL1P10243 752 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 NUDT1P36639 197 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 GGCXP38435 758 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 SLC12A1Q13621 1099 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 CST6Q15828 149 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 HNRNPA1L2Q32P51 320 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 ALFQ53S48 1182 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 CCDC185Q8N715 623 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 MFSD2AQ8NA29 543 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 OR8K1Q8NGG5 319 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 FAM172AQ8WUF8 416 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 CPLX3Q8WVH0 158 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 MCEEQ96PE7 176 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 SELENOOQ9BVL4 669 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 TRIM7Q9C029 511 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 ABHD10Q9NUJ1 306 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 SEPT11Q9NVA2 429 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 COX16Q9P0S2 106 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 PPARGC1AQ9UBK2 798 aaKnown RBP13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 SERGEFQ9UGK8 458 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 SNX10Q9Y5X0 201 aa13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 ARID1BQ8NFD5 2236 aaPredicted RBP13.98□□□□□ -0.17
SCAMP4-206ENST00000460767 FAM72CH0Y354 149 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 TLR4O00206 839 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 ATMINO43313 823 aaPredicted RBP13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 RNASEH1O60930 286 aaKnown RBP13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 CLDN11O75508 207 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 CNTN5O94779 1100 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 CSKP41240 450 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 CDH4P55283 916 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 PITRM1Q5JRX3 1037 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 RABGAP1LQ5R372 815 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 FAM72AQ5TYM5 149 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 CDCP2Q5VXM1 449 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 NAPEPLDQ6IQ20 393 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 FAM72DQ6L9T8 149 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 SND1Q7KZF4 910 aaKnown RBP eCLIP13.97□□□□□ -0.175e-8■□□□□ 11
SCAMP4-206ENST00000460767 NLRP14Q86W24 1093 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 FAM72BQ86X60 149 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 CIR1Q86X95 450 aaPredicted RBP13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 FAM181AQ8N9Y4 354 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 MED8Q96G25 268 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 MRFAP1L1Q96HT8 127 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 MAGEB5Q9BZ81 275 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 DPH1Q9BZG8 443 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 SEMA4CQ9C0C4 833 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 RETREG1Q9H6L5 497 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 AASDHPPTQ9NRN7 309 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 STIM2Q9P246 746 aa13.97□□□□□ -0.17
SCAMP4-206ENST00000460767 NAV2Q8IVL1 2488 aa13.96□□□□□ -0.17
SCAMP4-206ENST00000460767 A0A1W2PP55 124 aa13.96□□□□□ -0.17
SCAMP4-206ENST00000460767 TARSL2A2RTX5 802 aaKnown RBP13.96□□□□□ -0.17
SCAMP4-206ENST00000460767 TYW5A2RUC4 315 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms