RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 ABCG4Q9H172 646 aa12.65□□□□□ -0.38
TRA2B-206ENST00000456380 SYNCQ9H7C4 482 aa12.65□□□□□ -0.38
TRA2B-206ENST00000456380 POLR1BQ9H9Y6 1135 aa12.65□□□□□ -0.38
TRA2B-206ENST00000456380 ASCL3Q9NQ33 180 aa12.65□□□□□ -0.38
TRA2B-206ENST00000456380 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.65□□□□□ -0.38
TRA2B-206ENST00000456380 KLF15Q9UIH9 416 aa12.65□□□□□ -0.38
TRA2B-206ENST00000456380 FADS3Q9Y5Q0 445 aa12.65□□□□□ -0.38
TRA2B-206ENST00000456380 COL12A1Q99715 3063 aa12.65□□□□□ -0.38
TRA2B-206ENST00000456380 BSNQ9UPA5 3926 aa12.65□□□□□ -0.38
TRA2B-206ENST00000456380 SPTY2D1-AS1A0A0U1RR47 76 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 A0A1W2PNU3 283 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 FOXN3O00409 490 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 ZMPSTE24O75844 475 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 CSF2P04141 144 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 PNMA6AP0CW24 399 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 ADRB3P13945 408 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 OR1E1P30953 314 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 RECQLP46063 649 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 SULT1E1P49888 294 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 DUSP3P51452 185 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 NEK3P51956 506 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 SNX16P57768 344 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 RPS21P63220 83 aaKnown RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 DEUP1Q05D60 604 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 ARHGAP40Q5TG30 622 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 LRRC31Q6UY01 552 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 KYAT3Q6YP21 454 aaKnown RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 IRF2BP1Q8IU81 584 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 ZDHHC17Q8IUH5 632 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 ZNF548Q8NEK5 533 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 MAPK15Q8TD08 544 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 PPP1R16AQ96I34 528 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 TBCBQ99426 244 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 USP29Q9HBJ7 922 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 SIX2Q9NPC8 291 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 ZNF212Q9UDV6 495 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 TRPM6Q9BX84 2022 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 COL6A6A6NMZ7 2263 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 MAST4O15021 2626 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 ILVBLA1L0T0 632 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 LZTS3O60299 673 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 F9P00740 461 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 NME1P15531 152 aaKnown RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 TGM2P21980 687 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 ITGB7P26010 798 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 L1CAMP32004 1257 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 TMPRSS3P57727 454 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 ISXQ2M1V0 245 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 SLC25A52Q3SY17 297 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 TPRG1LQ5T0D9 272 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 BROXQ5VW32 411 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 KIAA1161Q6NSJ0 714 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 FEM1CQ96JP0 617 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 KLF6Q99612 283 aaPredicted RBP12.64□□□□□ -0.39
TRA2B-206ENST00000456380 SPON2Q9BUD6 331 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 DNAJC12Q9UKB3 198 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 STAP1Q9ULZ2 295 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 ACTL7AQ9Y615 435 aa12.64□□□□□ -0.39
TRA2B-206ENST00000456380 FAM170AA1A519 330 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 GTPBP10A4D1E9 387 aaKnown RBP12.63□□□□□ -0.39
TRA2B-206ENST00000456380 KLK10O43240 276 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 SPINT1O43278 529 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 AP1G1O43747 822 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 SRGAP2O75044 1071 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 GADD45BO75293 160 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-206ENST00000456380 GABRB2P47870 512 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 SERPINH1P50454 418 aaKnown RBP12.63□□□□□ -0.39
TRA2B-206ENST00000456380 DNA2P51530 1060 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 UCNP55089 124 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 ARF5P84085 180 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 SLC20A2Q08357 652 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 CDKN3Q16667 212 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 TAF1BQ53T94 588 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-206ENST00000456380 CARD16Q5EG05 197 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 RETSATQ6NUM9 610 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 ZCCHC8Q6NZY4 707 aaKnown RBP12.63□□□□□ -0.39
TRA2B-206ENST00000456380 GUSBP11Q6P575 273 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 PARS2Q7L3T8 475 aaKnown RBP12.63□□□□□ -0.39
TRA2B-206ENST00000456380 PARGQ86W56 976 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 KCNE4Q8WWG9 221 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 WBP1Q96G27 269 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 VCPIP1Q96JH7 1222 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 LENG8Q96PV6 779 aaPredicted RBP12.63□□□□□ -0.39
TRA2B-206ENST00000456380 HEPHQ9BQS7 1158 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 SEMA4CQ9C0C4 833 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 CEP44Q9C0F1 390 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 RWDD2AQ9UIY3 292 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 SATB2Q9UPW6 733 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 FCF1Q9Y324 198 aaKnown RBP12.63□□□□□ -0.39
TRA2B-206ENST00000456380 CSNK1G3Q9Y6M4 447 aa12.63□□□□□ -0.39
TRA2B-206ENST00000456380 CPED1A4D0V7 1026 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 IGLON5A6NGN9 336 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 AQP9O43315 295 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 CD160O95971 181 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 FLT3P36888 993 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 RABIFP47224 123 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 CCNHP51946 323 aaPredicted RBP12.62□□□□□ -0.39
TRA2B-206ENST00000456380 RHDQ02161 417 aa12.62□□□□□ -0.39
TRA2B-206ENST00000456380 PDE1CQ14123 709 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms