RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 PRDM12Q9H4Q4 367 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SPHK2Q9NRA0 654 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 TDP1Q9NUW8 608 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 GULP1Q9UBP9 304 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 NUDT5Q9UKK9 219 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 TARM1B6A8C7 271 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 GOLGA8SH3BPF8 625 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 TRIM24O15164 1050 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 MLNP12872 115 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 CD9P21926 228 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 GABRB3P28472 473 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 GABRR2P28476 465 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 LSP1P33241 339 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 EPHB3P54753 998 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 YBEYP58557 167 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 MLLT1Q03111 559 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 CAV1Q03135 178 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 PABPC1LQ4VXU2 614 aaKnown RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 FAM91A1Q658Y4 838 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 MAATS1Q7Z4T9 603 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 CLEC14AQ86T13 490 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 LAPTM4BQ86VI4 370 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 RASSF3Q86WH2 238 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 CEP57Q86XR8 500 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 CELF5Q8N6W0 485 aaKnown RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 ANKS4BQ8N8V4 417 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 DCAF4L2Q8NA75 395 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 ATL2Q8NHH9 583 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 DNASE1L2Q92874 299 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 TBC1D31Q96DN5 1066 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SNF8Q96H20 258 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 KIFC1Q9BW19 673 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 MAGEH1Q9H213 219 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 WDCPQ9H6R7 721 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SLC24A3Q9HC58 644 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 PRMT8Q9NR22 394 aaPredicted RBP5.05□□□□□ -1.6
RIF1-207ENST00000454583 C2orf42Q9NWW7 574 aa5.05□□□□□ -1.6
RIF1-207ENST00000454583 SMAD6O43541 496 aaKnown RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 CST8O60676 142 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ASMTLO95671 621 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SRCP12931 536 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ARSAP15289 507 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 DRD3P35462 400 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 GRIA1P42261 906 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SERPINH1P50454 418 aaKnown RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 CDR1P51861 262 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 NAP1L1P55209 391 aaKnown RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 ATP11AP98196 1134 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SLC18A2Q05940 514 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SLC12A1Q13621 1099 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 FASTKD3Q14CZ7 662 aaKnown RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 MORF4L2Q15014 288 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 GEN1Q17RS7 908 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 MGAT5BQ3V5L5 792 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 TEX44Q53QW1 395 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ADGRD1Q6QNK2 874 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 AFTPHQ6ULP2 937 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 Q7L0L9 218 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ASRGL1Q7L266 308 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 MPP5Q8N3R9 675 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 UBL4BQ8N7F7 174 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 LRRN4Q8WUT4 740 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 IRF7Q92985 503 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SPATA13Q96N96 652 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SERPINB12Q96P63 405 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SEPT5Q99719 369 aaPredicted RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 C1QTNF1Q9BXJ1 281 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 TDRD1Q9BXT4 1180 aaKnown RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 RAB17Q9H0T7 212 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 LATS2Q9NRM7 1088 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 DDIT4Q9NX09 232 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 MPP6Q9NZW5 540 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 THAP10Q9P2Z0 257 aaPredicted RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 PNMA8BQ9ULN7 279 aaPredicted RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 DUSP12Q9UNI6 340 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 SHOC2Q9UQ13 582 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 PRRC2BQ5JSZ5 2229 aaKnown RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 CFAP47Q6ZTR5 3102 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 THADAQ6YHU6 1953 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 A0A1B0GVM2 712 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 FAM170AA1A519 330 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 TCAF2A6NFQ2 919 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 C2CD2LO14523 706 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 AP2A1O95782 977 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ALADP13716 330 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 CPB1P15086 417 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 CREB1P16220 341 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ITGA8P53708 1063 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 RPS24P62847 133 aaKnown RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 SLC10A7Q0GE19 358 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 OLIG2Q13516 323 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 CAMK2GQ13555 558 aaPredicted RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 HNRNPDQ14103 355 aaKnown RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 SLC29A2Q14542 456 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 DHCR24Q15392 516 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 LRRC8BQ6P9F7 803 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 ARID3BQ8IVW6 561 aaPredicted RBP5.04□□□□□ -1.6
RIF1-207ENST00000454583 LZTR1Q8N653 840 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 MDGA1Q8NFP4 955 aa5.04□□□□□ -1.6
RIF1-207ENST00000454583 OR2A12Q8NGT7 310 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms