RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 TRIM65Q6PJ69 517 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KYAT3Q6YP21 454 aaKnown RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ERN2Q76MJ5 926 aaKnown RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ABI3BPQ7Z7G0 1075 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PHLDB2Q86SQ0 1253 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 VASH2Q86V25 355 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC47A2Q86VL8 602 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 VPS36Q86VN1 386 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PARGQ86W56 976 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FAM131BQ86XD5 332 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CREBRFQ8IUR6 639 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLC35F3Q8IY50 421 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZNF683Q8IZ20 524 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DCAF4L2Q8NA75 395 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PCDH19Q8TAB3 1148 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZNF606Q8WXB4 792 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PRR11Q96HE9 360 aaPredicted RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 MED15Q96RN5 788 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TBCBQ99426 244 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ANP32EQ9BTT0 268 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SPON2Q9BUD6 331 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 WRAP53Q9BUR4 548 aaKnown RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 LRRC61Q9BV99 259 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TKTL2Q9H0I9 626 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ABCG4Q9H172 646 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 THAP9Q9H5L6 903 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SYNCQ9H7C4 482 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 POLR1BQ9H9Y6 1135 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 DYRK4Q9NR20 520 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KLHL11Q9NVR0 708 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NLGN3Q9NZ94 848 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 IL36AQ9UHA7 158 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RABGEF1Q9UJ41 708 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KIAA1257Q9ULG3 409 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ENTPD2Q9Y5L3 495 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 WASF2Q9Y6W5 498 aa6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 USP9XQ93008 2570 aaPredicted RBP6.12□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CHD5Q8TDI0 1954 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SCN8AQ9UQD0 1980 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PPP1R3GB7ZBB8 358 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ALOX15BO15296 676 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 EFSO43281 561 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SRGAP2O75044 1071 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CLDN11O75508 207 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SMC2O95347 1197 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PAK4O96013 591 aaPredicted RBP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PRKCGP05129 697 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 UGT2B4P06133 528 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FAM87AP0C7U9 286 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ALPPL2P10696 532 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 JUNDP17535 347 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ITIH2P19823 946 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ACVRL1P37023 503 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ACADSBP45954 432 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 LSSP48449 732 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SERPINH1P50454 418 aaKnown RBP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NEK3P51956 506 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PLK1P53350 603 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 VAC14Q08AM6 782 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 OVGP1Q12889 678 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NFATC3Q12968 1075 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 EIF2B5Q13144 721 aaKnown RBP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PAK1Q13153 545 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 STIM1Q13586 685 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 COBLL1Q53SF7 1204 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 PRRT3Q5FWE3 981 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FAM102AQ5T9C2 384 aaPredicted RBP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 BROXQ5VW32 411 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RBM44Q6ZP01 1051 aaKnown RBP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TMEM110Q86TL2 294 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 JAMLQ86YT9 394 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 RYBPQ8N488 228 aaPredicted RBP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 EMC1Q8N766 993 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 EHBP1Q8NDI1 1231 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SPATA20Q8TB22 786 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 EXOC2Q96KP1 924 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 BMFQ96LC9 184 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CEP63Q96MT8 703 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZNF578Q96N58 590 aaPredicted RBP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GSDMAQ96QA5 445 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KLF6Q99612 283 aaPredicted RBP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 C2orf49Q9BVC5 232 aaPredicted RBP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TRIM62Q9BVG3 475 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 MAGEB5Q9BZ81 275 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 KDM4CQ9H3R0 1056 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 EPB41L5Q9HCM4 733 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ATP13A1Q9HD20 1204 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 THSD1Q9NS62 852 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 GPR27Q9NS67 375 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 NDFIP2Q9NV92 336 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZNF212Q9UDV6 495 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 APOBEC3BQ9UH17 382 aaKnown RBP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 CNTN6Q9UQ52 1028 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 TBC1D30Q9Y2I9 924 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 SSUH2Q9Y2M2 353 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 COQ6Q9Y2Z9 468 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 FADS3Q9Y5Q0 445 aa6.11□□□□□ -1.43
HLA-DPA3-207ENST00000454398 ZFC3H1O60293 1989 aaKnown RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms