RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 SMYD2Q9NRG4 433 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 ZNF212Q9UDV6 495 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 GPSM3Q9Y4H4 160 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 ANAPC1Q9H1A4 1944 aa10.74□□□□□ -0.69
VIPAS39-203ENST00000448935 TCP11X1B4DZS4 312 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 TEX28O15482 410 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 LZTS3O60299 673 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 USP12O75317 370 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 STC2O76061 302 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 KIAA0754O94854 1291 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 ALADP13716 330 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 CORO1AP31146 461 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 GP5P40197 560 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 WDR4P57081 412 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 CRADDP78560 199 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PDK4Q16654 411 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 GRTP1Q5TC63 336 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PDPK2PQ6A1A2 396 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 BRICD5Q6PL45 260 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 SETD3Q86TU7 594 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 RNF135Q8IUD6 432 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 DENND1CQ8IV53 801 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 ELMOD1Q8N336 334 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 CCDC197Q8NCU1 140 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PPHLN1Q8NEY8 458 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 IPMKQ8NFU5 416 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 TCP10LQ8TDR4 215 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 LRRC8CQ8TDW0 803 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PABPC5Q96DU9 382 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 IMP4Q96G21 291 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 LRCH3Q96II8 777 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 SEC16BQ96JE7 1060 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 CABS1Q96KC9 395 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PLCD4Q9BRC7 762 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 KIFC1Q9BW19 673 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 KLF16Q9BXK1 252 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 EMILIN2Q9BXX0 1053 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PRKD2Q9BZL6 878 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 VPS11Q9H270 941 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 MRM3Q9HC36 420 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PIH1D1Q9NWS0 290 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 UBP1Q9NZI7 540 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 LZTS1Q9Y250 596 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PLXNA4Q9HCM2 1894 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 MIA3Q5JRA6 1907 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 A0A1B0GVM2 712 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 TYW5A2RUC4 315 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 TCAF2A6NFQ2 919 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PRAMEF11O60813 436 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PIAS1O75925 651 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PEX11BO96011 259 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 LRG1P02750 347 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 MBL2P11226 248 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PFKLP17858 780 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PAMP19021 973 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 CA8P35219 290 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 SPRP35270 261 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PBX2P40425 430 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 CCNFP41002 786 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 CSE1LP55060 971 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 ITKQ08881 620 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 ZNF177Q13360 481 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 LAMB3Q13751 1172 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 ZNF235Q14590 738 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 ITIH4Q14624 930 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 RFTN1Q14699 578 aaPredicted RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 FAM133BQ5BKY9 247 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 LVRNQ6Q4G3 990 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PACS1Q6VY07 963 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 ZNF783Q6ZMS7 281 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 RTL10Q7L3V2 364 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 YTHDF3Q7Z739 585 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PIGWQ7Z7B1 504 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 TRIM42Q8IWZ5 723 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PLPP7Q8NBV4 271 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 SPATA22Q8NHS9 363 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 PHOSPHO2Q8TCD6 241 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 MRPS31Q92665 395 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 ATP2A3Q93084 1043 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 SERAC1Q96JX3 654 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 GCNAQ96QF7 691 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 FICDQ9BVA6 458 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 POLR1EQ9GZS1 481 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 MTIF3Q9H2K0 278 aaKnown RBP10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 ARNT2Q9HBZ2 717 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 MLXIPLQ9NP71 852 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 NT5MQ9NPB1 228 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 RWDD3Q9Y3V2 267 aa10.73□□□□□ -0.69
VIPAS39-203ENST00000448935 CHD5Q8TDI0 1954 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 OBSL1O75147 1896 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 ZCWPW2A0A1B0GU75 182 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 ILVBLA1L0T0 632 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 J3KR12 359 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 CXCL14O95715 111 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 MT-CYBP00156 380 aaPredicted RBP10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 F11P03951 625 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 CNPP09543 421 aaKnown RBP10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 JUNDP17535 347 aa10.72□□□□□ -0.69
VIPAS39-203ENST00000448935 ADRA1DP25100 572 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms