RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ITGA8P53708 1063 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 HLTFQ14527 1009 aaKnown RBP eCLIP19.84■□□□□ 0.77
SGCE-207ENST00000447873 PRPSAP1Q14558 356 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 EIF4HQ15056 248 aaKnown RBP19.84■□□□□ 0.77
SGCE-207ENST00000447873 PGBD5Q8N414 524 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 SORCS1Q8WY21 1168 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 P2RY13Q9BPV8 354 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 HEBP1Q9NRV9 189 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 ELOVL2Q9NXB9 296 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 GRHL1Q9NZI5 618 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 ANAPC5Q9UJX4 755 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 ERVW-1Q9UQF0 538 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 PIAS3Q9Y6X2 628 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 COL4A2P08572 1712 aa19.84■□□□□ 0.77
SGCE-207ENST00000447873 UQCRHLA0A096LP55 91 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 PRRT4C9JH25 899 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 SPECC1L-ADORA2AF8WAN1 911 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 MUSKO15146 869 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 SMAD6O43541 496 aaKnown RBP19.83■□□□□ 0.77
SGCE-207ENST00000447873 UQCRHP07919 91 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 DLDP09622 509 aaKnown RBP19.83■□□□□ 0.77
SGCE-207ENST00000447873 SRFP11831 508 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 SRCP12931 536 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 CTHP32929 405 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 NNMTP40261 264 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 LMAN1P49257 510 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 CARSP49589 748 aaKnown RBP19.83■□□□□ 0.77
SGCE-207ENST00000447873 PLTPP55058 493 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 RHOAP61586 193 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 ZP2Q05996 745 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 SYCP2LQ5T4T6 812 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 WDR93Q6P2C0 686 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 RALGPS2Q86X27 583 aaPredicted RBP19.83■□□□□ 0.77
SGCE-207ENST00000447873 PPIL6Q8IXY8 311 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 SH2D3CQ8N5H7 860 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 CYB5D2Q8WUJ1 264 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 CPT1BQ92523 772 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 EXOC4Q96A65 974 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 PPP1R2P1Q96PQ5 205 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 FCRL5Q96RD9 977 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 MGME1Q9BQP7 344 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 SLC25A51Q9H1U9 297 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 C8orf33Q9H7E9 229 aaPredicted RBP19.83■□□□□ 0.77
SGCE-207ENST00000447873 PLA2G4CQ9UP65 541 aa19.83■□□□□ 0.77
SGCE-207ENST00000447873 COL6A3P12111 3177 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 GOLGA6CA6NDK9 693 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 GOLGA6BA6NDN3 693 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 APRTP07741 180 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 GOLGA6DP0CG33 693 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 GALK1P51570 392 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 VSNL1P62760 191 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 SEMA5AQ13591 1074 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 ACCSLQ4AC99 568 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 RNASEH2BQ5TBB1 312 aaKnown RBP19.83■□□□□ 0.76
SGCE-207ENST00000447873 SUGP1Q8IWZ8 645 aaKnown RBP19.83■□□□□ 0.76
SGCE-207ENST00000447873 UCMAQ8WVF2 138 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 ART4Q93070 314 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 EXOC2Q96KP1 924 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 SEMA3CQ99985 751 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 SLC2A4RGQ9NR83 387 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 GOLGA6AQ9NYA3 693 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 SLCO3A1Q9UIG8 710 aa19.83■□□□□ 0.76
SGCE-207ENST00000447873 AAR2Q9Y312 384 aaKnown RBP19.83■□□□□ 0.76
SGCE-207ENST00000447873 FARP1Q9Y4F1 1045 aaPredicted RBP19.83■□□□□ 0.76
SGCE-207ENST00000447873 ANXA9O76027 345 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 SRPRAP08240 638 aaKnown RBP19.82■□□□□ 0.76
SGCE-207ENST00000447873 TNFRSF8P28908 595 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 SCNN1BP51168 640 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 DSC2Q02487 901 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 CAV1Q03135 178 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 MORF4L2Q15014 288 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 HIBCHQ6NVY1 386 aaPredicted RBP19.82■□□□□ 0.76
SGCE-207ENST00000447873 HOOK3Q86VS8 718 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 SPATA22Q8NHS9 363 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 IMP4Q96G21 291 aaKnown RBP19.82■□□□□ 0.76
SGCE-207ENST00000447873 UBP1Q9NZI7 540 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 LHX3Q9UBR4 397 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 NFU1Q9UMS0 254 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 SLC8A2Q9UPR5 921 aa19.82■□□□□ 0.76
SGCE-207ENST00000447873 TTC24A2A3L6 582 aaPredicted RBP19.81■□□□□ 0.76
SGCE-207ENST00000447873 GLULP15104 373 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 CES1P23141 567 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 ST8SIA6P61647 398 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 NSUN2Q08J23 767 aaKnown RBP eCLIP19.81■□□□□ 0.76
SGCE-207ENST00000447873 KCNJ11Q14654 390 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 PTPRNQ16849 979 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 ALG1LQ6GMV1 187 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 TXNDC11Q6PKC3 985 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 ZDHHC24Q6UX98 284 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 CCNI2Q6ZMN8 369 aaPredicted RBP19.81■□□□□ 0.76
SGCE-207ENST00000447873 RNF135Q8IUD6 432 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 SFTPA1Q8IWL2 248 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 PDCD7Q8N8D1 485 aaKnown RBP19.81■□□□□ 0.76
SGCE-207ENST00000447873 FBXO25Q8TCJ0 367 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 MRGPRX3Q96LB0 322 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 RBM15Q96T37 977 aaKnown RBP eCLIP19.81■□□□□ 0.76
SGCE-207ENST00000447873 GORASP1Q9BQQ3 440 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 MLPHQ9BV36 600 aaPredicted RBP19.81■□□□□ 0.76
SGCE-207ENST00000447873 FAM129AQ9BZQ8 928 aa19.81■□□□□ 0.76
SGCE-207ENST00000447873 CEP44Q9C0F1 390 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms