RNA–Protein interactions for RNA: ENST00000447726.6

PBX3-207, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene PBX3, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-207ENST00000447726 SPATA22Q8NHS9 363 aa16.6■□□□□ 0.25
PBX3-207ENST00000447726 ZSCAN18Q8TBC5 510 aaPredicted RBP16.6■□□□□ 0.25
PBX3-207ENST00000447726 RDH11Q8TC12 318 aa16.6■□□□□ 0.25
PBX3-207ENST00000447726 PDCD6IPQ8WUM4 868 aaKnown RBP16.6■□□□□ 0.25
PBX3-207ENST00000447726 EZH1Q92800 747 aaPredicted RBP16.6■□□□□ 0.25
PBX3-207ENST00000447726 HDAC11Q96DB2 347 aa16.6■□□□□ 0.25
PBX3-207ENST00000447726 TEKT5Q96M29 485 aa16.6■□□□□ 0.25
PBX3-207ENST00000447726 EFCAB1Q9HAE3 211 aa16.6■□□□□ 0.25
PBX3-207ENST00000447726 DDIT4Q9NX09 232 aa16.6■□□□□ 0.25
PBX3-207ENST00000447726 ACOT8O14734 319 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 RNASEH2AO75792 299 aaKnown RBP16.59■□□□□ 0.25
PBX3-207ENST00000447726 BCAS2O75934 225 aaPredicted RBP16.59■□□□□ 0.25
PBX3-207ENST00000447726 PGK1P00558 417 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 NCAM1P13591 858 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 IREB2P48200 963 aaKnown RBP16.59■□□□□ 0.25
PBX3-207ENST00000447726 PTAR1Q7Z6K3 402 aaPredicted RBP16.59■□□□□ 0.25
PBX3-207ENST00000447726 ADCY4Q8NFM4 1077 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 B4GALNT2Q8NHY0 566 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 RNF217Q8TC41 542 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 TMEM40Q8WWA1 233 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 FBXW11Q9UKB1 542 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 PIN4Q9Y237 131 aaKnown RBP16.59■□□□□ 0.25
PBX3-207ENST00000447726 ANKRD6Q9Y2G4 727 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 CCDC160A6NGH7 325 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 GALNT2Q10471 571 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 CDH17Q12864 832 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 SLC12A1Q13621 1099 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 SETD3Q86TU7 594 aaPredicted RBP16.59■□□□□ 0.25
PBX3-207ENST00000447726 KCTD13Q8WZ19 329 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 HIC2Q96JB3 615 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 GPR78Q96P69 363 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 SLC9A7Q96T83 725 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 TMEM30AQ9NV96 361 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 NDUFA13Q9P0J0 144 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 TRHDEQ9UKU6 1024 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 FIS1Q9Y3D6 152 aa16.59■□□□□ 0.25
PBX3-207ENST00000447726 A0A1B0GTW7 788 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 NCAM2O15394 837 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 VAPBO95292 243 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 USP17L7P0C7H9 530 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 YBX3P16989 372 aaKnown RBP eCLIP16.58■□□□□ 0.25
PBX3-207ENST00000447726 CCNA1P78396 465 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 POU6F1Q14863 301 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 MYLK3Q32MK0 819 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 FAM219BQ5XKK7 198 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 ITPRIPL1Q6GPH6 555 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 ZNF280DQ6N043 979 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 KLHDC10Q6PID8 442 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 GK5Q6ZS86 529 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 PCDH20Q8N6Y1 951 aaKnown RBP16.58■□□□□ 0.25
PBX3-207ENST00000447726 ARRDC4Q8NCT1 418 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 ZFP28Q8NHY6 868 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 EDEM1Q92611 657 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 NTAN1Q96AB6 310 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 KIFC1Q9BW19 673 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.58■□□□□ 0.25
PBX3-207ENST00000447726 VTI1BQ9UEU0 232 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 ACOT9Q9Y305 439 aa16.58■□□□□ 0.25
PBX3-207ENST00000447726 NRCAMQ92823 1304 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 SHROOM3Q8TF72 1996 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 OTOFQ9HC10 1997 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 NEMP2A6NFY4 417 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 KCNU1A8MYU2 1149 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 TADA2AO75478 443 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 MT-CYBP00156 380 aaPredicted RBP16.58■□□□□ 0.24
PBX3-207ENST00000447726 RGS2P41220 211 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 PNPLA4P41247 253 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 ZNF792Q3KQV3 632 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 SV2CQ496J9 727 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 SH2D4BQ5SQS7 431 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 IL23RQ5VWK5 629 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 GPC2Q8N158 579 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 TMEM102Q8N9M5 508 aaPredicted RBP16.58■□□□□ 0.24
PBX3-207ENST00000447726 ATP6V1E2Q96A05 226 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 EMID1Q96A84 441 aaPredicted RBP16.58■□□□□ 0.24
PBX3-207ENST00000447726 KATNBL1Q9H079 304 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 ADA2Q9NZK5 511 aa16.58■□□□□ 0.24
PBX3-207ENST00000447726 MRPL42Q9Y6G3 142 aaKnown RBP16.58■□□□□ 0.24
PBX3-207ENST00000447726 BRCA1P38398 1863 aaKnown RBP16.57■□□□□ 0.24
PBX3-207ENST00000447726 SLC22A2O15244 555 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 LRIG2O94898 1065 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 MMP3P08254 477 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 CYP2C9P11712 490 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 HNRNPLP14866 589 aaKnown RBP eCLIP16.57■□□□□ 0.244e-7■■■■□ 21.4
PBX3-207ENST00000447726 DARSP14868 501 aaKnown RBP16.57■□□□□ 0.24
PBX3-207ENST00000447726 SMPD1P17405 629 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 HADHAP40939 763 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 DAOAP59103 153 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 SCAPQ12770 1279 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 MAP7Q14244 749 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 HERC3Q15034 1050 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 ARHGAP36Q6ZRI8 547 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 PCDHAC1Q9H158 963 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 VTA1Q9NP79 307 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 OR12D3Q9UGF7 316 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 KCNH4Q9UQ05 1017 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 SBF1O95248 1867 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 SLCO1B7G3V0H7 640 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 TRPA1O75762 1119 aa16.57■□□□□ 0.24
PBX3-207ENST00000447726 TNFAIP8O95379 198 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms