RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 ANXA8L1Q5VT79 327 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 ZCCHC9Q8N567 271 aaKnown RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 ST13P5Q8NFI4 369 aaPredicted RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 SPATA20Q8TB22 786 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 CD99L2Q8TCZ2 262 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 APOPT1Q96IL0 206 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 TMEM175Q9BSA9 504 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 CAPN10Q9HC96 672 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 GPSM3Q9Y4H4 160 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 INSL6Q9Y581 213 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 NALCNQ8IZF0 1738 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 KLHL41O60662 606 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 NUDT14O95848 222 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 VARSP26640 1264 aaKnown RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 SARSP49591 514 aaKnown RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 UBE3AQ05086 875 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 GAD2Q05329 585 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 ORC1Q13415 861 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 SHROOM1Q2M3G4 852 aaPredicted RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 TRMT5Q32P41 509 aaKnown RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 XKR4Q5GH76 650 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 GPR158Q5T848 1215 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 ABHD15Q6UXT9 468 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 CHSY3Q70JA7 882 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 EMC1Q8N766 993 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 SLC35C1Q96A29 364 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 FEM1CQ96JP0 617 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 MFSD14AQ96MC6 490 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 KLC4Q9NSK0 619 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 TAGLN3Q9UI15 199 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 NCF1BA6NI72 391 aaPredicted RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 NCF1CA8MVU1 366 aaPredicted RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 BTN3A1O00481 513 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 ZBTB39O15060 712 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 IRAK2O43187 625 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 SEC22BO75396 215 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 NCF1P14598 390 aaPredicted RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 AMPD1P23109 780 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 SERPINB3P29508 390 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 PSMC6P62333 389 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 ZACNQ401N2 412 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 INTS6LQ5JSJ4 861 aaKnown RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 ZNF662Q6ZS27 426 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 FGD2Q7Z6J4 655 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 KYQ8NBH2 561 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 MAML3Q96JK9 1138 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 ZNHIT2Q9UHR6 403 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 PHTF1Q9UMS5 762 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 USP2O75604 605 aaPredicted RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 LTA4HP09960 611 aaKnown RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 MYL12AP19105 171 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 FASP25445 335 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 ST3GAL1Q11201 340 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 PLPP4Q5VZY2 271 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 TRAPPC12Q8WVT3 735 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 ASZ1Q8WWH4 475 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 UPF1Q92900 1129 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 SLC25A23Q9BV35 468 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 PSMC3P17980 439 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 OR1D2P34982 312 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 SERPINB5P36952 375 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 MAPKAPK2P49137 400 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 HNMTP50135 292 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 IRF8Q02556 426 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 CAPSQ13938 189 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 SAMD4BQ5PRF9 694 aaKnown RBP8.64□□□□□ -1.03
PTPN3-204ENST00000446349 VMP1Q96GC9 406 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 TRMOQ9BU70 441 aa8.64□□□□□ -1.03
PTPN3-204ENST00000446349 OTCP00480 354 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 MRPS22P82650 360 aaKnown RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 AP5B1Q2VPB7 878 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 TCEAL5Q5H9L2 206 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 SAMD14Q8IZD0 417 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ROGDIQ9GZN7 287 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CDC42EP4Q9H3Q1 356 aaKnown RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ST6GALNAC4Q9H4F1 302 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 SEMA3GQ9NS98 782 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 AGO1Q9UL18 857 aaKnown RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 HSD17B2P37059 387 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 RFX3P48380 749 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 SLC1A6P48664 564 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ACTR3P61158 418 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CNKSR3Q6P9H4 555 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CAMK1DQ8IU85 385 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 ZFPM1Q8IX07 1006 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 OR52L1Q8NGH7 329 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CLP1Q92989 425 aaKnown RBP8.63□□□□□ -1.03
PTPN3-204ENST00000446349 NRDE2Q9H7Z3 1164 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 PLIN4Q96Q06 1357 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 DLG5Q8TDM6 1919 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 C5orf60A6NFR6 353 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CENPXA8MT69 81 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 KCNH1O95259 989 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CYP1A2P05177 515 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 VHLP40337 213 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 PCYT1AP49585 367 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 LGALS3BPQ08380 585 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 CCDC142Q17RM4 750 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 FAXCQ5TGI0 409 aa8.63□□□□□ -1.03
PTPN3-204ENST00000446349 LLGL2Q6P1M3 1020 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms