RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 PCDHGA12O60330 932 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 RNGTTO60942 597 aaKnown RBP19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 LEFTY1O75610 366 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 GSRP00390 522 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 CCNHP51946 323 aaPredicted RBP19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 C21orf59P57076 290 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 PPP2CBP62714 309 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 PPP2CAP67775 309 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 OVGP1Q12889 678 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 ZNF423Q2M1K9 1284 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 POM121L1PQ3SYA9 428 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 INO80DQ53TQ3 878 aaPredicted RBP19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 NAPEPLDQ6IQ20 393 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 IQCHQ86VS3 1027 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 NAXDQ8IW45 347 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 ARRDC3Q96B67 414 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 SERAC1Q96JX3 654 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 HECAQ9UBI9 543 aaPredicted RBP19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 AP4E1Q9UPM8 1137 aa19.18■□□□□ 0.66
ATPAF2-201ENST00000444058 A0A1W2PR77 199 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 FLRT2O43155 660 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 PRPSAP2O60256 369 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 GYPCP04921 128 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 ITGB7P26010 798 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 HNRNPH3P31942 346 aaKnown RBP19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 PCK1P35558 622 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 DNA2P51530 1060 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 NDST2P52849 883 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 TPI1P60174 286 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 SNRPD1P62314 119 aaKnown RBP19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 SIM1P81133 766 aaPredicted RBP19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 SETMARQ53H47 684 aaPredicted RBP19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 MFSD2AQ8NA29 543 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 OR2AP1Q8NGE2 309 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 GRIN3AQ8TCU5 1115 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 CPLX3Q8WVH0 158 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 AASDHPPTQ9NRN7 309 aa19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 TPRP12270 2363 aaKnown RBP19.17■□□□□ 0.66
ATPAF2-201ENST00000444058 RASA4BC9J798 803 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 PRAMEF26H0Y7S4 382 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 RASA4O43374 803 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 BUB1O43683 1085 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 MAGEC1O60732 1142 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 CBFA2T3O75081 653 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 LRCH4O75427 683 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 TRIM16O95361 564 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 POP4O95707 220 aaKnown RBP19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 WNT1P04628 370 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 MIPP30301 263 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 HCAR3P49019 387 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 CCT8P50990 548 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 NEK3P51956 506 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 SERINC3Q13530 473 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 TRIP6Q15654 476 aaKnown RBP19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 KCNT1Q5JUK3 1230 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 LAYNQ6UX15 382 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 GLRX5Q86SX6 157 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 ZSCAN30Q86W11 494 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 DNAAF5Q86Y56 855 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 TRIM7Q9C029 511 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 XPO4Q9C0E2 1151 aaKnown RBP19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 DHX35Q9H5Z1 703 aaKnown RBP19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 PCOLCE2Q9UKZ9 415 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 WASF3Q9UPY6 502 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 PCDHB9Q9Y5E1 797 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 ACTL7AQ9Y615 435 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 ACACBO00763 2458 aa19.16■□□□□ 0.66
ATPAF2-201ENST00000444058 TLR4O00206 839 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 EEF2KO00418 725 aaKnown RBP19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 CBFA2T2O43439 604 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 CASP14P31944 242 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 PIGHQ14442 188 aaPredicted RBP19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 CYP4V2Q6ZWL3 525 aaPredicted RBP19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 HORMAD1Q86X24 394 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 HMCESQ96FZ2 354 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 PEBP4Q96S96 227 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 ELF4Q99607 663 aaPredicted RBP19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 SNRNP25Q9BV90 132 aaKnown RBP19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 OSBPL1AQ9BXW6 950 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 TM6SF2Q9BZW4 377 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 LRRC19Q9H756 370 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 ERVMER34-1Q9H9K5 563 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 GDF3Q9NR23 364 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 MYO1AQ9UBC5 1043 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 PCSK1NQ9UHG2 260 aa19.15■□□□□ 0.66
ATPAF2-201ENST00000444058 A0A087X0T9 212 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 A0A1B0GTQ1 180 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 SPAARA0A1B0GVQ0 90 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 H0Y8X5 98 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 RNF103O00237 685 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 WNT9AO14904 365 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 YKT6O15498 198 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 AP1G1O43747 822 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 FAM228BP0C875 321 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 ADRB3P13945 408 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 TRIM14Q14142 442 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 STAT4Q14765 748 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 CA9Q16790 459 aa19.14■□□□□ 0.65
ATPAF2-201ENST00000444058 MYLK3Q32MK0 819 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms