RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ENPEPQ07075 957 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 ILF2Q12905 390 aaKnown RBP22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 PSMD5Q16401 504 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 ZDHHC24Q6UX98 284 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 ZNF467Q7Z7K2 595 aaPredicted RBP22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 SYTL1Q8IYJ3 562 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 CCDC185Q8N715 623 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 TLCD1Q96CP7 247 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 TMEM79Q9BSE2 394 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 GLOD4Q9HC38 313 aa22.68■■□□□ 1.22
CTDSPL-206ENST00000443503 BPGMP07738 259 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 PTPN9P43378 593 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 DCAF12L1Q5VU92 463 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 TRPC4APQ8TEL6 797 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 MLPHQ9BV36 600 aaPredicted RBP22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 COPS7BQ9H9Q2 264 aaPredicted RBP22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 E7ENQ6 273 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 FGFR1P11362 822 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 HNRNPLP14866 589 aaKnown RBP eCLIP22.67■■□□□ 1.221e-6■■■□□ 17.8
CTDSPL-206ENST00000443503 MSH3P20585 1137 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 LMO2P25791 158 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 PABPC1LQ4VXU2 614 aaKnown RBP22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 OLFML2BQ68BL8 750 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 ASB2Q96Q27 587 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 TSPAN18Q96SJ8 248 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 ZNF184Q99676 751 aaPredicted RBP22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 NDUFA13Q9P0J0 144 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 KRT36O76013 467 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 TPSB2P20231 275 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 CDC25CP30307 473 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 ASPAP45381 313 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 AIF1P55008 147 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 IKBKEQ14164 716 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 TPSAB1Q15661 275 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 SH3PXD2AQ5TCZ1 1133 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 FIG4Q92562 907 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 OSGEPL1Q9H4B0 414 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 HMGXB4Q9UGU5 601 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 HLA-DPA1P20036 260 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 LRPAP1P30533 357 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 VAC14Q08AM6 782 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 CYP1B1Q16678 543 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 STXBP5Q5T5C0 1151 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 SLC39A4Q6P5W5 647 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 EFCAB3Q8N7B9 438 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 SYT17Q9BSW7 474 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 PNPOQ9NVS9 261 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 PLLPQ9Y342 182 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 RAP2CQ9Y3L5 183 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 DYRK1BQ9Y463 629 aa22.67■■□□□ 1.22
CTDSPL-206ENST00000443503 KDM3BQ7LBC6 1761 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 CCDC154A6NI56 674 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 KPNA3O00505 521 aaPredicted RBP22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 ARIH2O95376 493 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 ELNP15502 786 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 GPC1P35052 558 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 CLCNKBP51801 687 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 GDF10P55107 478 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 CDK18Q07002 472 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 IL27RAQ6UWB1 636 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 PLEKHA8Q96JA3 519 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 BPIFA1Q9NP55 256 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 LNPEPQ9UIQ6 1025 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 ZNF229Q9UJW7 825 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 HNRNPCP07910 306 aaKnown RBP eCLIP22.66■■□□□ 1.224e-8■□□□□ 10.5
CTDSPL-206ENST00000443503 OTOP3Q7RTS5 596 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 PCDH19Q8TAB3 1148 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 MCOLN3Q8TDD5 553 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 MED8Q96G25 268 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 SNX27Q96L92 541 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 FTHL17Q9BXU8 183 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 SDCBP2Q9H190 292 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 ASB8Q9H765 288 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 PEX11AO75192 247 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 FCGR1AP12314 374 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 COX4I1P13073 169 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 SERPINA4P29622 427 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 NDUFV1P49821 464 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 ZBTB17Q13105 803 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 ITGA7Q13683 1181 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 DQX1Q8TE96 717 aaKnown RBP22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 PHACTR1Q9C0D0 580 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 SH3BP4Q9P0V3 963 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 LBPP18428 481 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 GPD2P43304 727 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 ATXN1P54253 815 aaKnown RBP22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 WASHC5Q12768 1159 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 CCDC85BQ15834 202 aaPredicted RBP22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 NOL9Q5SY16 702 aaKnown RBP22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 FAM45BPQ6NSW5 357 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 FAM45AQ8TCE6 357 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 MRPL57Q9BQC6 102 aaKnown RBP22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 RHOJQ9H4E5 214 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 GIMAP4Q9NUV9 329 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 OPTCQ9UBM4 332 aa22.66■■□□□ 1.22
CTDSPL-206ENST00000443503 MYBPHLA2RUH7 354 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 ADCY6O43306 1168 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 SH3BGRLO75368 114 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 PIGRP01833 764 aa22.65■■□□□ 1.22
CTDSPL-206ENST00000443503 MLNP12872 115 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms