RNA–Protein interactions for RNA: ENST00000440860.1

LINC00354-202, long intergenic non-protein coding RNA 354, humanhuman

TSL 2 BASIC

Gene LINC00354, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00354-202ENST00000440860 SMTNL1A8MU46 457 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 KDM4EB2RXH2 506 aaPredicted RBP5.05□□□□□ -1.6
LINC00354-202ENST00000440860 SEPT4O43236 478 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 KIF1CO43896 1103 aaKnown RBP5.05□□□□□ -1.6
LINC00354-202ENST00000440860 SERPINI2O75830 405 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 ZNF432O94892 652 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 IL1AP01583 271 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 IGKV3-20P01619 116 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 MMP3P08254 477 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 CKMT1AP12532 417 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 ERVFC1-1P60608 527 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 ARHGAP8P85298 464 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 GRSF1Q12849 480 aaKnown RBP eCLIP5.05□□□□□ -1.6
LINC00354-202ENST00000440860 AP5B1Q2VPB7 878 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 C9orf50Q5SZB4 431 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 USP43Q70EL4 1123 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 GALNT15Q8N3T1 639 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 TCP11L2Q8N4U5 519 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 TEX45Q8NA69 505 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 VPS37AQ8NEZ2 397 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 POF1BQ8WVV4 589 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 TMEM18Q96B42 140 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 FIZ1Q96SL8 496 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 SLC25A33Q9BSK2 321 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 RETREG1Q9H6L5 497 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 PLCB1Q9NQ66 1216 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 NLKQ9UBE8 527 aa5.05□□□□□ -1.6
LINC00354-202ENST00000440860 PLSCR5A0PG75 271 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 OR6C68A6NDL8 312 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 LDB3O75112 727 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 SOX30O94993 753 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 PNPLA4P41247 253 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 HTR3AP46098 478 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 PRKAA2P54646 552 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 HDAC1Q13547 482 aaPredicted RBP5.04□□□□□ -1.6
LINC00354-202ENST00000440860 BLMHQ13867 455 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 BYSLQ13895 437 aaKnown RBP5.04□□□□□ -1.6
LINC00354-202ENST00000440860 TRIM14Q14142 442 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 IL13RA2Q14627 380 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 KIF19Q2TAC6 998 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 C9orf57Q5W0N0 161 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 RBFAQ8N0V3 343 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 TMEM163Q8TC26 289 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 WFIKKN2Q8TEU8 576 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 FAM216AQ8WUB2 273 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 NPFFR1Q9GZQ6 430 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 CXorf56Q9H5V9 222 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 CHODLQ9H9P2 273 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 GRHPRQ9UBQ7 328 aa5.04□□□□□ -1.6
LINC00354-202ENST00000440860 A0A096LPK6 155 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 IGHV4-28A0A0C4DH34 117 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 A0A1B0GUV1 79 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 FAM157AC9JC47 383 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 GRID2O43424 1007 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 CSF1P09603 554 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 YWHAQP27348 245 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 C21orf33P30042 268 aaPredicted RBP5.03□□□□□ -1.6
LINC00354-202ENST00000440860 MVDP53602 400 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 TUBA1BP68363 451 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 SMAD1Q15797 465 aaKnown RBP5.03□□□□□ -1.6
LINC00354-202ENST00000440860 TYW3Q6IPR3 259 aaKnown RBP5.03□□□□□ -1.6
LINC00354-202ENST00000440860 RETSATQ6NUM9 610 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 TMC8Q8IU68 726 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 ZBTB8BQ8NAP8 495 aaPredicted RBP5.03□□□□□ -1.6
LINC00354-202ENST00000440860 NEXN-AS1Q8NBZ9 246 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 RASSF8Q8NHQ8 419 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 LTV1Q96GA3 475 aaPredicted RBP5.03□□□□□ -1.6
LINC00354-202ENST00000440860 TXNDC15Q96J42 360 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 ZNF700Q9H0M5 742 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 TLR8Q9NR97 1041 aaKnown RBP5.03□□□□□ -1.6
LINC00354-202ENST00000440860 GRHL1Q9NZI5 618 aa5.03□□□□□ -1.6
LINC00354-202ENST00000440860 IGLV5-52A0A0A0MRZ9 124 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 LOC102724159A0A0B4J2E5 919 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 A0A1B0GVM2 712 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 MT3P25713 68 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 PTPN9P43378 593 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 BNC1Q01954 994 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 CYP4A11Q02928 519 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 CHAF1AQ13111 956 aaPredicted RBP5.02□□□□□ -1.61
LINC00354-202ENST00000440860 CUL4BQ13620 913 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 THOC5Q13769 683 aaKnown RBP5.02□□□□□ -1.61
LINC00354-202ENST00000440860 CTTNQ14247 550 aaKnown RBP5.02□□□□□ -1.61
LINC00354-202ENST00000440860 BRD3Q15059 726 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 PWP2Q15269 919 aaKnown RBP5.02□□□□□ -1.61
LINC00354-202ENST00000440860 TBC1D9BQ66K14 1250 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 TANGO2Q6ICL3 276 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 CACNA2D3Q8IZS8 1091 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 LINS1Q8NG48 757 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 GPT2Q8TD30 523 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 TBC1D22AQ8WUA7 517 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 NCSTNQ92542 709 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 KTI12Q96EK9 354 aaPredicted RBP5.02□□□□□ -1.61
LINC00354-202ENST00000440860 RBM17Q96I25 401 aaKnown RBP5.02□□□□□ -1.61
LINC00354-202ENST00000440860 DUX5Q96PT3 197 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 CTDSP1Q9GZU7 261 aa5.02□□□□□ -1.61
LINC00354-202ENST00000440860 SRP68Q9UHB9 627 aaKnown RBP5.02□□□□□ -1.61
LINC00354-202ENST00000440860 C17orf100A8MU93 164 aa5.01□□□□□ -1.61
LINC00354-202ENST00000440860 IPO5O00410 1097 aaKnown RBP5.01□□□□□ -1.61
LINC00354-202ENST00000440860 CHL1O00533 1208 aa5.01□□□□□ -1.61
LINC00354-202ENST00000440860 SLC25A17O43808 307 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms