RNA–Protein interactions for RNA: ENST00000439928.2

SPATA13-213, Transcript of spermatogenesis associated 13, humanhuman

TSL 1 (best) BASIC

Gene SPATA13, Length 1,721 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-213ENST00000439928 LINGO4Q6UY18 593 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 PLCD3Q8N3E9 789 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 ZCCHC9Q8N567 271 aaKnown RBP12.34□□□□□ -0.43
SPATA13-213ENST00000439928 CNTD1Q8N815 330 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 NAT8LQ8N9F0 302 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 AENQ8WTP8 325 aaKnown RBP12.34□□□□□ -0.43
SPATA13-213ENST00000439928 ALG14Q96F25 216 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 ZNF419Q96HQ0 510 aaPredicted RBP12.34□□□□□ -0.43
SPATA13-213ENST00000439928 FRMD8Q9BZ67 464 aaPredicted RBP12.34□□□□□ -0.43
SPATA13-213ENST00000439928 PLA2G2FQ9BZM2 168 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 BRD9Q9H8M2 597 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 HPS4Q9NQG7 708 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 EIF2B3Q9NR50 452 aaKnown RBP12.34□□□□□ -0.43
SPATA13-213ENST00000439928 SLC25A13Q9UJS0 675 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 F5P12259 2224 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 MAP2K7O14733 419 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 TP73O15350 636 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 IVLP07476 585 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 POLR2EP19388 210 aaKnown RBP12.34□□□□□ -0.43
SPATA13-213ENST00000439928 CD68P34810 354 aaPredicted RBP12.34□□□□□ -0.43
SPATA13-213ENST00000439928 HSPA9P38646 679 aaKnown RBP12.34□□□□□ -0.43
SPATA13-213ENST00000439928 MAGEA6P43360 314 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 ARL4CP56559 192 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 MAXP61244 160 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 FUT11Q495W5 492 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 ANKRD22Q5VYY1 191 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 PDIK1LQ8N165 341 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 GOLGA6L1Q8N7Z2 621 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 PDCD7Q8N8D1 485 aaKnown RBP12.34□□□□□ -0.43
SPATA13-213ENST00000439928 CAVIN3Q969G5 261 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 PSKH2Q96QS6 385 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 FCRL5Q96RD9 977 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 PHF7Q9BWX1 381 aaPredicted RBP12.34□□□□□ -0.43
SPATA13-213ENST00000439928 FSD1LQ9BXM9 530 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 SLC25A51Q9H1U9 297 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 GTSE1Q9NYZ3 720 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 DEC1Q9P2X7 70 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 FAM50BQ9Y247 325 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 ATP8A1Q9Y2Q0 1164 aa12.34□□□□□ -0.43
SPATA13-213ENST00000439928 TCF20Q9UGU0 1960 aaKnown RBP12.33□□□□□ -0.43
SPATA13-213ENST00000439928 COL4A2P08572 1712 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 CXorf51AA0A1B0GTR3 108 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 C2CD4DB7Z1M9 353 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 ANHXE9PGG2 379 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 PSMD3O43242 534 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 TULP3O75386 442 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 ZMPSTE24O75844 475 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 TMCC1O94876 653 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 TMEM63AO94886 807 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 FAM153BP0C7A2 387 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 SERPINH1P50454 418 aaKnown RBP12.33□□□□□ -0.44
SPATA13-213ENST00000439928 GEMP55040 296 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 SLC20A2Q08357 652 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 SLMAPQ14BN4 828 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 ITPRIPL2Q3MIP1 535 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 FAM153CQ494X1 144 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 PREPLQ4J6C6 727 aaPredicted RBP12.33□□□□□ -0.44
SPATA13-213ENST00000439928 CENPUQ71F23 418 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.33□□□□□ -0.44
SPATA13-213ENST00000439928 ATP11CQ8NB49 1132 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 TSEN2Q8NCE0 465 aaKnown RBP12.33□□□□□ -0.44
SPATA13-213ENST00000439928 CSGALNACT1Q8TDX6 532 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 WFIKKN2Q8TEU8 576 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 LMLNQ96KR4 655 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 GDAP1L1Q96MZ0 367 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 RBM15Q96T37 977 aaKnown RBP eCLIP12.33□□□□□ -0.44
SPATA13-213ENST00000439928 MGME1Q9BQP7 344 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 LRRC40Q9H9A6 602 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 FAM153AQ9UHL3 310 aa12.33□□□□□ -0.44
SPATA13-213ENST00000439928 INTS6Q9UL03 887 aaKnown RBP12.33□□□□□ -0.44
SPATA13-213ENST00000439928 TCRBV7S3A2A0A539 114 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 OTOL1A6NHN0 477 aaPredicted RBP12.32□□□□□ -0.44
SPATA13-213ENST00000439928 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.32□□□□□ -0.44
SPATA13-213ENST00000439928 SLC34A2O95436 690 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 AP2A1O95782 977 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
SPATA13-213ENST00000439928 RHOAP61586 193 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 ECT2LQ008S8 904 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 DHX9Q08211 1270 aaKnown RBP12.32□□□□□ -0.44
SPATA13-213ENST00000439928 ASTLQ6HA08 431 aaPredicted RBP12.32□□□□□ -0.44
SPATA13-213ENST00000439928 GRAMD4Q6IC98 578 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 NAPEPLDQ6IQ20 393 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 ETFBKMTQ8IXQ9 262 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 MCUQ8NE86 351 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 TTC8Q8TAM2 541 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 NXPE3Q969Y0 559 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 IMP4Q96G21 291 aaKnown RBP12.32□□□□□ -0.44
SPATA13-213ENST00000439928 SEMA3CQ99985 751 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 RPP25Q9BUL9 199 aaKnown RBP12.32□□□□□ -0.44
SPATA13-213ENST00000439928 CIPCQ9C0C6 399 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 XAB2Q9HCS7 855 aaKnown RBP12.32□□□□□ -0.44
SPATA13-213ENST00000439928 MED4Q9NPJ6 270 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 VPS45Q9NRW7 570 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 UBP1Q9NZI7 540 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 FBXO10Q9UK96 956 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 SLC27A6Q9Y2P4 619 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 ACTL7AQ9Y615 435 aa12.32□□□□□ -0.44
SPATA13-213ENST00000439928 MUC22E2RYF6 1773 aaPredicted RBP12.32□□□□□ -0.44
SPATA13-213ENST00000439928 PPFIA2O75334 1257 aa12.31□□□□□ -0.44
SPATA13-213ENST00000439928 MT-CYBP00156 380 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms