RNA–Protein interactions for RNA: ENST00000439445.5

CCDC66-207, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 709 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-207ENST00000439445 SMAD6O43541 496 aaKnown RBP10.05□□□□□ -0.8
CCDC66-207ENST00000439445 USP12O75317 370 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 PIAS2O75928 621 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 C1QL1O75973 258 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 ADCY5O95622 1261 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 PRNPP04156 253 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 MPOP05164 745 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 CKMT1AP12532 417 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 MYF5P13349 255 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 RRM1P23921 792 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 RECQLP46063 649 aaPredicted RBP10.05□□□□□ -0.8
CCDC66-207ENST00000439445 RNASE9P60153 205 aaKnown RBP10.05□□□□□ -0.8
CCDC66-207ENST00000439445 SLC6A3Q01959 620 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 APBA1Q02410 837 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 PTK2Q05397 1052 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 C5orf22Q49AR2 442 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 ALFQ53S48 1182 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 ZNF542PQ5EBM4 170 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 SEL1L3Q68CR1 1132 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 OLFML1Q6UWY5 402 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 LRRC31Q6UY01 552 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 LINGO4Q6UY18 593 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 GBP6Q6ZN66 633 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 Q6ZSR6 202 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 ERN2Q76MJ5 926 aaKnown RBP10.05□□□□□ -0.8
CCDC66-207ENST00000439445 ZNF605Q86T29 641 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 ERICH1Q86X53 443 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 CHST14Q8NCH0 376 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 ZNF248Q8NDW4 579 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 APOLD1Q96LR9 279 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 PSMB7Q99436 277 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 TKTL2Q9H0I9 626 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 TNKS2Q9H2K2 1166 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 CAAP1Q9H8G2 361 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 PIGVQ9NUD9 493 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 DNAJC28Q9NX36 388 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 APEX2Q9UBZ4 518 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 VPS51Q9UID3 782 aa10.05□□□□□ -0.8
CCDC66-207ENST00000439445 ZFR2Q9UPR6 939 aaKnown RBP10.05□□□□□ -0.8
CCDC66-207ENST00000439445 MAST4O15021 2626 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 A0A0D9SEW6 157 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 CFAP99D6REC4 459 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 RNF103O00237 685 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 SCAMP1O15126 338 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 DAB1O75553 588 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 ENDOD1O94919 500 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 PAK4O96013 591 aaPredicted RBP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 ERBB2P04626 1255 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 GIMD1P0DJR0 217 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 TFE3P19532 575 aaPredicted RBP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 OR1E1P30953 314 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 CXCR3P49682 368 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 DUSP3P51452 185 aaPredicted RBP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 DNA2P51530 1060 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 PCBP4P57723 403 aaKnown RBP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 HNRNPKP61978 463 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 GABREP78334 506 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 EXOC3L4Q17RC7 722 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 TUSC1Q2TAM9 212 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 BRMS1LQ5PSV4 323 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 GCNT7Q6ZNI0 430 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 SLC26A9Q7LBE3 791 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 PTAR1Q7Z6K3 402 aaPredicted RBP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 TFAP2DQ7Z6R9 452 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 ABI3BPQ7Z7G0 1075 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 SETD3Q86TU7 594 aaPredicted RBP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 DCP2Q8IU60 420 aaKnown RBP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 LSMEM2Q8N112 164 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 ZNF843Q8N446 348 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 C1orf131Q8NDD1 294 aaKnown RBP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 FAM174AQ8TBP5 190 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 GRIN3AQ8TCU5 1115 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 SHC3Q92529 594 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 IFT43Q96FT9 208 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 PPP1R16AQ96I34 528 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 FEM1CQ96JP0 617 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 BMFQ96LC9 184 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 ZNF578Q96N58 590 aaPredicted RBP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 DEPDC7Q96QD5 511 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 NPY6RQ99463 290 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 SPON2Q9BUD6 331 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 HDAC8Q9BY41 377 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 ANLNQ9NQW6 1124 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 RRN3Q9NYV6 651 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 NLGN3Q9NZ94 848 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 MPP6Q9NZW5 540 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 IL36AQ9UHA7 158 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 IPO11Q9UI26 975 aaKnown RBP10.04□□□□□ -0.8
CCDC66-207ENST00000439445 PAXBP1Q9Y5B6 917 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 SNX10Q9Y5X0 201 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 HS3ST3A1Q9Y663 406 aa10.04□□□□□ -0.8
CCDC66-207ENST00000439445 BOD1L1Q8NFC6 3051 aa10.03□□□□□ -0.8
CCDC66-207ENST00000439445 CPED1A4D0V7 1026 aa10.03□□□□□ -0.8
CCDC66-207ENST00000439445 POM121BA6NF01 834 aa10.03□□□□□ -0.8
CCDC66-207ENST00000439445 DRGXA6NNA5 263 aa10.03□□□□□ -0.8
CCDC66-207ENST00000439445 A6NNZ2 444 aa10.03□□□□□ -0.8
CCDC66-207ENST00000439445 K7ESM1 405 aa10.03□□□□□ -0.8
CCDC66-207ENST00000439445 FOXN3O00409 490 aaPredicted RBP10.03□□□□□ -0.8
CCDC66-207ENST00000439445 SRGAP2O75044 1071 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms