RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 MTIF2P46199 727 aaKnown RBP14.4□□□□□ -0.1
LINC01088-201ENST00000437737 UBASH3AP57075 661 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 FANCCQ00597 558 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 MAPK8IP2Q13387 824 aaPredicted RBP14.4□□□□□ -0.1
LINC01088-201ENST00000437737 SPIDRQ14159 915 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 FZD2Q14332 565 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 STILQ15468 1287 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 CNGA2Q16280 664 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 CCDC40Q4G0X9 1142 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 PERM1Q5SV97 790 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 SYPL2Q5VXT5 272 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 CXorf57Q6NSI4 855 aaKnown RBP14.4□□□□□ -0.1
LINC01088-201ENST00000437737 XKR5Q6UX68 686 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 CREBRFQ8IUR6 639 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 SH2D3CQ8N5H7 860 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 UBR7Q8N806 425 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 LMX1AQ8TE12 382 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 SGF29Q96ES7 293 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 CCDC114Q96M63 670 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 IL12RB2Q99665 862 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 TRIM62Q9BVG3 475 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 HSD3B7Q9H2F3 369 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 SALL4Q9UJQ4 1053 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 ZFR2Q9UPR6 939 aaKnown RBP14.4□□□□□ -0.1
LINC01088-201ENST00000437737 CSNK1G3Q9Y6M4 447 aa14.4□□□□□ -0.1
LINC01088-201ENST00000437737 UBR5O95071 2799 aaPredicted RBP14.39□□□□□ -0.11
LINC01088-201ENST00000437737 KCNU1A8MYU2 1149 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 EFSO43281 561 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 SUV39H1O43463 412 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 TRUB2O95900 331 aaKnown RBP14.39□□□□□ -0.11
LINC01088-201ENST00000437737 RPIAP49247 311 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 MCCD1P59942 119 aaPredicted RBP14.39□□□□□ -0.11
LINC01088-201ENST00000437737 CENPCQ03188 943 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 KYAT3Q6YP21 454 aaKnown RBP14.39□□□□□ -0.11
LINC01088-201ENST00000437737 JAMLQ86YT9 394 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 WDR48Q8TAF3 677 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 GLMNQ92990 594 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 RPRD1AQ96P16 312 aaPredicted RBP14.39□□□□□ -0.11
LINC01088-201ENST00000437737 ZSWIM1Q9BR11 485 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 TUBGCP2Q9BSJ2 902 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 FEM1AQ9BSK4 669 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.39□□□□□ -0.11
LINC01088-201ENST00000437737 ARMCX3Q9UH62 379 aaPredicted RBP14.39□□□□□ -0.11
LINC01088-201ENST00000437737 COQ4Q9Y3A0 265 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 HS3ST3A1Q9Y663 406 aa14.39□□□□□ -0.11
LINC01088-201ENST00000437737 SPTY2D1-AS1A0A0U1RR47 76 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 POM121BA6NF01 834 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 CALCAP01258 141 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 PRNPP04156 253 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 ITGB2P05107 769 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 FAM87AP0C7U9 286 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 SFTPCP11686 197 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 SRCP12931 536 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 ATP1A3P13637 1013 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 JUNDP17535 347 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 SLC5A2P31639 672 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 PDE1CQ14123 709 aaPredicted RBP14.38□□□□□ -0.11
LINC01088-201ENST00000437737 ERN2Q76MJ5 926 aaKnown RBP14.38□□□□□ -0.11
LINC01088-201ENST00000437737 IRF2BP1Q8IU81 584 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 ATP11CQ8NB49 1132 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 TMIEQ8NEW7 156 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 OR52K2Q8NGK3 314 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 GRIN3AQ8TCU5 1115 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 NAT6Q93015 286 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 ALG14Q96F25 216 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 MRFAP1L1Q96HT8 127 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 BMFQ96LC9 184 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 PRMT1Q99873 361 aaKnown RBP14.38□□□□□ -0.11
LINC01088-201ENST00000437737 SLC17A9Q9BYT1 436 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 MUC3BQ9H195 1237 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 FAM204AQ9H8W3 233 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 EPB41L5Q9HCM4 733 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 GPR27Q9NS67 375 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 ANKMY1Q9P2S6 941 aa14.38□□□□□ -0.11
LINC01088-201ENST00000437737 SYNJ2BP-COX16A0A087WUM0 186 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 RNF225M0QZC1 329 aaPredicted RBP14.37□□□□□ -0.11
LINC01088-201ENST00000437737 TPP1O14773 563 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 CASC3O15234 703 aaKnown RBP14.37□□□□□ -0.11
LINC01088-201ENST00000437737 ADCY5O95622 1261 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 PAK4O96013 591 aaPredicted RBP14.37□□□□□ -0.11
LINC01088-201ENST00000437737 ITGB6P18564 788 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 CDC25BP30305 580 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 ACADSBP45954 432 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 RABIFP47224 123 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 PDX1P52945 283 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 COPB1P53618 953 aaKnown RBP14.37□□□□□ -0.11
LINC01088-201ENST00000437737 INHBCP55103 352 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 SRSF6Q13247 344 aaKnown RBP14.37□□□□□ -0.11
LINC01088-201ENST00000437737 KRT31Q15323 416 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 TGIF1Q15583 401 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 MAN2A1Q16706 1144 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 TMEM259Q4ZIN3 620 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 HSP90AA4PQ58FG1 418 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 FKBP15Q5T1M5 1219 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 FBXL22Q6P050 247 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 BEND5Q7L4P6 421 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 C14orf80Q86SX3 495 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 FBXO39Q8N4B4 442 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 OR2A12Q8NGT7 310 aa14.37□□□□□ -0.11
LINC01088-201ENST00000437737 PPP1R16AQ96I34 528 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms