RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 LDB2O43679 373 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 HBP1O60381 514 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 IL1AP01583 271 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 CUL4BQ13620 913 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 IL13RA2Q14627 380 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 PLCB4Q15147 1175 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 HLFQ16534 295 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 IZUMO4Q1ZYL8 232 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 AP5B1Q2VPB7 878 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 ZNF484Q5JVG2 852 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 C8orf82Q6P1X6 216 aaPredicted RBP3.59□□□□□ -1.84
CLK1-204ENST00000432425 TRIM74Q86UV6 250 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 TRIM73Q86UV7 250 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 FJX1Q86VR8 437 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 MYCT1Q8N699 235 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 SDCCAG3Q96C92 435 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 RBM17Q96I25 401 aaKnown RBP3.59□□□□□ -1.84
CLK1-204ENST00000432425 HERC2P3Q9BVR0 1158 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 LHPPQ9H008 270 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 GRHL1Q9NZI5 618 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 KIF17Q9P2E2 1029 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 RAI2Q9Y5P3 530 aa3.59□□□□□ -1.84
CLK1-204ENST00000432425 A0A096LPK6 155 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 TARSL2A2RTX5 802 aaKnown RBP3.58□□□□□ -1.84
CLK1-204ENST00000432425 ITM2AO43736 263 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 VEGFAP15692 232 aaPredicted RBP3.58□□□□□ -1.84
CLK1-204ENST00000432425 ADD2P35612 726 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 GJC1P36383 396 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 THPOP40225 353 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 GPR12P47775 334 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 AMTP48728 403 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 RRP1P56182 461 aaKnown RBP3.58□□□□□ -1.84
CLK1-204ENST00000432425 KRT72Q14CN4 511 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 FAM83BQ5T0W9 1011 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 TBC1D9BQ66K14 1250 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 CREB3L2Q70SY1 520 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 ANKRD44Q8N8A2 993 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 LINS1Q8NG48 757 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 AFG1LQ8WV93 481 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 ATOH1Q92858 354 aaPredicted RBP3.58□□□□□ -1.84
CLK1-204ENST00000432425 TMEM18Q96B42 140 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 PPP1R10Q96QC0 940 aaKnown RBP3.58□□□□□ -1.84
CLK1-204ENST00000432425 FAM167BQ9BTA0 163 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 DERAQ9Y315 318 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 PCDHGB1Q9Y5G3 927 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 SCN5AQ14524 2016 aa3.58□□□□□ -1.84
CLK1-204ENST00000432425 CLEC18AA5D8T8 446 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 C17orf100A8MU93 164 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 FAM155BO75949 473 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 TK1P04183 234 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 FCGR1AP12314 374 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 MTNR1AP48039 350 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 ART1P52961 327 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 RHBDL3P58872 404 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 ACTR2P61160 394 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 POSTNQ15063 836 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 ADCK5Q3MIX3 580 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 TUBB8Q3ZCM7 444 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 RBM23Q86U06 439 aaKnown RBP3.57□□□□□ -1.84
CLK1-204ENST00000432425 GHDCQ8N2G8 530 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 TMEM57Q8N5G2 664 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 TEX45Q8NA69 505 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 CLEC18CQ8NCF0 446 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 TBC1D22AQ8WUA7 517 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 CTDSP1Q9GZU7 261 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 TWSG1Q9GZX9 223 aa3.57□□□□□ -1.84
CLK1-204ENST00000432425 KDM4EB2RXH2 506 aaPredicted RBP3.56□□□□□ -1.84
CLK1-204ENST00000432425 KCNJ13O60928 360 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 CKMT1AP12532 417 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 GAS1P54826 345 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 SEC61A1P61619 476 aaKnown RBP3.56□□□□□ -1.84
CLK1-204ENST00000432425 CTXN3Q4LDR2 81 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 ANKRD45Q5TZF3 282 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 PATL1Q86TB9 770 aaKnown RBP3.56□□□□□ -1.84
CLK1-204ENST00000432425 CLIP4Q8N3C7 705 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 FAM216AQ8WUB2 273 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 LMLNQ96KR4 655 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 NPLQ9BXD5 320 aaPredicted RBP3.56□□□□□ -1.84
CLK1-204ENST00000432425 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 VPS33BQ9H267 617 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 CXorf56Q9H5V9 222 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 SUFUQ9UMX1 484 aa3.56□□□□□ -1.84
CLK1-204ENST00000432425 IGHV4-28A0A0C4DH34 117 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 BTBD18B2RXH4 712 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 FAM157AC9JC47 383 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 STX16-NPEPL1H3BU86 382 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 STX16O14662 325 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 SERPINI2O75830 405 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 SOX30O94993 753 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 RXRAP19793 462 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 C21orf33P30042 268 aaPredicted RBP3.55□□□□□ -1.84
CLK1-204ENST00000432425 PTPN9P43378 593 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 RPL36AP83881 106 aaKnown RBP3.55□□□□□ -1.84
CLK1-204ENST00000432425 EFHC1Q5JVL4 640 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 CBWD5Q5RIA9 395 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 GJB7Q6PEY0 223 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 RBFAQ8N0V3 343 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 SETD9Q8NE22 299 aa3.55□□□□□ -1.84
CLK1-204ENST00000432425 TMED6Q8WW62 240 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms