RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 EVA1BQ9NVM1 165 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 NLGN3Q9NZ94 848 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 DAAM1Q9Y4D1 1078 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 HS3ST3A1Q9Y663 406 aa15.19■□□□□ 0.02
MSH5-208ENST00000429846 RIOK3O14730 519 aaKnown RBP15.18■□□□□ 0.02
MSH5-208ENST00000429846 RRP8O43159 456 aaKnown RBP15.18■□□□□ 0.02
MSH5-208ENST00000429846 ZNF821O75541 412 aaPredicted RBP15.18■□□□□ 0.02
MSH5-208ENST00000429846 MMEP08473 750 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 CKMT1AP12532 417 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 L1CAMP32004 1257 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 EIF2S3P41091 472 aaKnown RBP15.18■□□□□ 0.02
MSH5-208ENST00000429846 MAPKAPK2P49137 400 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 CCNHP51946 323 aaPredicted RBP15.18■□□□□ 0.02
MSH5-208ENST00000429846 ARF5P84085 180 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 INSM1Q01101 510 aaPredicted RBP15.18■□□□□ 0.02
MSH5-208ENST00000429846 SEMG2Q02383 582 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 C2CD6Q53TS8 623 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 HSP90AA4PQ58FG1 418 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 CARD16Q5EG05 197 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 TCP11X2Q5H9J9 407 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 NAA35Q5VZE5 725 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 SEL1L3Q68CR1 1132 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 CPA5Q8WXQ8 436 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 KLK6Q92876 244 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 RAB7BQ96AH8 199 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 FEM1CQ96JP0 617 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 DUSP23Q9BVJ7 150 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 SLC17A9Q9BYT1 436 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 NUP62CLQ9H1M0 184 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 METTL5Q9NRN9 209 aaKnown RBP15.18■□□□□ 0.02
MSH5-208ENST00000429846 GPR27Q9NS67 375 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 CHMP5Q9NZZ3 219 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 OR12D3Q9UGF7 316 aa15.18■□□□□ 0.02
MSH5-208ENST00000429846 GP1BAP07359 652 aa15.17■□□□□ 0.02
MSH5-208ENST00000429846 MMP8P22894 467 aa15.17■□□□□ 0.02
MSH5-208ENST00000429846 SDC4P31431 198 aa15.17■□□□□ 0.02
MSH5-208ENST00000429846 HNRNPKP61978 463 aaKnown RBP eCLIP15.17■□□□□ 0.02
MSH5-208ENST00000429846 ATP11AP98196 1134 aa15.17■□□□□ 0.02
MSH5-208ENST00000429846 MANEALQ5VSG8 457 aa15.17■□□□□ 0.02
MSH5-208ENST00000429846 PTAR1Q7Z6K3 402 aaPredicted RBP15.17■□□□□ 0.02
MSH5-208ENST00000429846 DRC7Q8IY82 874 aa15.17■□□□□ 0.02
MSH5-208ENST00000429846 SLC22A18ASQ8N1D0 253 aa15.17■□□□□ 0.02
MSH5-208ENST00000429846 ARHGEF26Q96DR7 871 aa15.17■□□□□ 0.02
MSH5-208ENST00000429846 SAMSN1Q9NSI8 373 aaKnown RBP15.17■□□□□ 0.02
MSH5-208ENST00000429846 UCKL1Q9NWZ5 548 aa15.17■□□□□ 0.02
MSH5-208ENST00000429846 NOCTQ9UK39 431 aaKnown RBP15.17■□□□□ 0.02
MSH5-208ENST00000429846 FCF1Q9Y324 198 aaKnown RBP15.17■□□□□ 0.02
MSH5-208ENST00000429846 FADS3Q9Y5Q0 445 aa15.17■□□□□ 0.02
MSH5-208ENST00000429846 EIF4E1BA6NMX2 242 aaKnown RBP15.16■□□□□ 0.02
MSH5-208ENST00000429846 H3BM21 787 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 RNF103O00237 685 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 SCAMP1O15126 338 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 FFAR2O15552 330 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 TSPAN6O43657 245 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 TLX3O43711 291 aaPredicted RBP15.16■□□□□ 0.02
MSH5-208ENST00000429846 MT-CO3P00414 261 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 CYP1A1P04798 512 aaPredicted RBP15.16■□□□□ 0.02
MSH5-208ENST00000429846 GIMD1P0DJR0 217 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 RHOQP17081 205 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 ADRA1BP35368 520 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 ACTN2P35609 894 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 PTPN9P43378 593 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 RABIFP47224 123 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 DUSP3P51452 185 aaPredicted RBP15.16■□□□□ 0.02
MSH5-208ENST00000429846 DNA2P51530 1060 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 GSCP56915 257 aaPredicted RBP15.16■□□□□ 0.02
MSH5-208ENST00000429846 CLDN2P57739 230 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 CDR2Q01850 454 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 POLD3Q15054 466 aaPredicted RBP15.16■□□□□ 0.02
MSH5-208ENST00000429846 TRIM72Q6ZMU5 477 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 Q6ZSR6 202 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 PARS2Q7L3T8 475 aaKnown RBP15.16■□□□□ 0.02
MSH5-208ENST00000429846 STRADAQ7RTN6 431 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 PARGQ86W56 976 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 EMC1Q8N766 993 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 FAM181AQ8N9Y4 354 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 DENND6BQ8NEG7 585 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 ASB12Q8WXK4 309 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 FGF11Q92914 225 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 LENG8Q96PV6 779 aaPredicted RBP15.16■□□□□ 0.02
MSH5-208ENST00000429846 UBL7Q96S82 380 aaPredicted RBP15.16■□□□□ 0.02
MSH5-208ENST00000429846 OSBPL2Q9H1P3 480 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 MAGEH1Q9H213 219 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 GANQ9H2C0 597 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 ZDHHC6Q9H6R6 413 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 TMEM248Q9NWD8 314 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 DNAJC28Q9NX36 388 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 NCKIPSDQ9NZQ3 722 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 HPCAL4Q9UM19 191 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 PTPRQQ9UMZ3 2332 aa15.16■□□□□ 0.02
MSH5-208ENST00000429846 SPTY2D1-AS1A0A0U1RR47 76 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 BRINP1O60477 761 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 CD160O95971 181 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 GSRP00390 522 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 CSF2P04141 144 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 TPM2P07951 284 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 NME1P15531 152 aaKnown RBP15.15■□□□□ 0.02
MSH5-208ENST00000429846 SNRPD1P62314 119 aaKnown RBP15.15■□□□□ 0.02
MSH5-208ENST00000429846 FMO1Q01740 532 aa15.15■□□□□ 0.02
MSH5-208ENST00000429846 MAPK8IP2Q13387 824 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms