RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 CARTPTQ16568 116 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 REP15Q6BDI9 236 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 DSG4Q86SJ6 1040 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 PIGZQ86VD9 579 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 LSMEM2Q8N112 164 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 CCNYL1Q8N7R7 359 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 SREK1Q8WXA9 508 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 CERS2Q96G23 380 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 CSF3RQ99062 836 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 EFHD1Q9BUP0 239 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 IDI2Q9BXS1 227 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 UNC93B1Q9H1C4 597 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 PDZD7Q9H5P4 517 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 TASP1Q9H6P5 420 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 CACNA2D2Q9NY47 1150 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 TCAF1Q9Y4C2 921 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 SLC30A1Q9Y6M5 507 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 KRT19P08727 400 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 BMP2P12643 396 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 CYP2F1P24903 491 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 TKTP29401 623 aaKnown RBP11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 SFNP31947 248 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 AVPR1AP37288 418 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 LRP8Q14114 963 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 SLC36A3Q495N2 470 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 AGKQ53H12 422 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 SLC27A3Q5K4L6 730 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 TBCELQ5QJ74 424 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 CYS1Q717R9 158 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 ERMP1Q7Z2K6 904 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 ZNF354CQ86Y25 554 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 CCDC60Q8IWA6 550 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 GABPB2Q8TAK5 448 aaPredicted RBP11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 SCYL1Q96KG9 808 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 RBBP8Q99708 897 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 HGH1Q9BTY7 390 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 C1orf50Q9BV19 199 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 VPS33BQ9H267 617 aa11.23□□□□□ -0.61
SEMA4D-209ENST00000429836 TRIM64A6NGJ6 449 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 TRIM64BA6NI03 449 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 C2CD4BA6NLJ0 364 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 USP12O75317 370 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 CAPN15O75808 1086 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SBK3P0C264 359 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 EEF1B2P24534 225 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 HPCAL1P37235 193 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SLC7A2P52569 658 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 ATXN1P54253 815 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 OSTNP61366 133 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 HEATR6Q6AI08 1181 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 FAM183BPQ6ZVS7 135 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 DHFR2Q86XF0 187 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SPATA6LQ8N4H0 392 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 COLGALT1Q8NBJ5 622 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 URGCPQ8TCY9 931 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 RPL10LQ96L21 214 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 GLT1D1Q96MS3 346 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 LGMNQ99538 433 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 TDRD1Q9BXT4 1180 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 LHX5Q9H2C1 402 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 IL1RL2Q9HB29 575 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 EGFL7Q9UHF1 273 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 OAZ3Q9UMX2 235 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SLX4Q8IY92 1834 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 TOR1BO14657 336 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 PPEF1O14829 653 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SLC22A2O15244 555 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 PHGDHO43175 533 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 JRKO75564 520 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 MT-CO1P00395 513 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 TTKP33981 857 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SOX11P35716 441 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 GNL1P36915 607 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 RGS7P49802 495 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 NKX2-5P52952 324 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 RAD23AP54725 363 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 IFITM3Q01628 133 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 PRKAA1Q13131 559 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 EMC2Q15006 297 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 CCDC14Q49A88 953 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 GRTP1Q5TC63 336 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SLFN12LQ6IEE8 588 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 CAMK1DQ8IU85 385 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 MFSD2AQ8NA29 543 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 OR9I1Q8NGQ6 314 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SNX19Q92543 992 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 ZNF669Q96BR6 464 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 OLFM1Q99784 485 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 MROQ9BYG7 248 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 RAVER2Q9HCJ3 691 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SEPT10Q9P0V9 454 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 QSER1Q2KHR3 1735 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 CCDC78A2IDD5 438 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 FAM47E-STBD1D6RA91 191 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 POLRMTO00411 1230 aaKnown RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 ELK4P28324 431 aa11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 SPRP35270 261 aaPredicted RBP11.22□□□□□ -0.61
SEMA4D-209ENST00000429836 MAGEA12P43365 314 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms