RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 JUPP14923 745 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 ITGB7P26010 798 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 ADRA1BP35368 520 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 NSFP46459 744 aaKnown RBP17.41■□□□□ 0.38
TRIM39-209ENST00000428728 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
TRIM39-209ENST00000428728 HES3Q5TGS1 186 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 FAM72AQ5TYM5 149 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 FAM72DQ6L9T8 149 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 NEK5Q6P3R8 708 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 PTAR1Q7Z6K3 402 aaPredicted RBP17.41■□□□□ 0.38
TRIM39-209ENST00000428728 TMPRSS12Q86WS5 348 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 FAM72BQ86X60 149 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 RYBPQ8N488 228 aaPredicted RBP17.41■□□□□ 0.38
TRIM39-209ENST00000428728 CCDC185Q8N715 623 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 PDCD7Q8N8D1 485 aaKnown RBP17.41■□□□□ 0.38
TRIM39-209ENST00000428728 OR6K2Q8NGY2 324 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 FAM172AQ8WUF8 416 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 TSC1Q92574 1164 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 PCDHB18PQ96TA0 734 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 HEPHQ9BQS7 1158 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 HDAC8Q9BY41 377 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 CAAP1Q9H8G2 361 aa17.41■□□□□ 0.38
TRIM39-209ENST00000428728 URB1O60287 2271 aaKnown RBP17.4■□□□□ 0.38
TRIM39-209ENST00000428728 FFAR2O15552 330 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 LRIG2O94898 1065 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 C1SP09871 688 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 ETFBP38117 255 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 PTPN9P43378 593 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 HDAC4P56524 1084 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 SLC20A2Q08357 652 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 PTP4A2Q12974 167 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 CARD16Q5EG05 197 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 FBXL19Q6PCT2 694 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 LEKR1Q6ZMV7 388 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 GCNT7Q6ZNI0 430 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 CLEC17AQ6ZS10 378 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 RBM43Q6ZSC3 357 aaKnown RBP17.4■□□□□ 0.38
TRIM39-209ENST00000428728 PARS2Q7L3T8 475 aaKnown RBP17.4■□□□□ 0.38
TRIM39-209ENST00000428728 STRADAQ7RTN6 431 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 ANKRD20A12PQ8NF67 263 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 NEK11Q8NG66 645 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 HNRNPLLQ8WVV9 542 aaKnown RBP17.4■□□□□ 0.38
TRIM39-209ENST00000428728 TBC1D31Q96DN5 1066 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 SELENOOQ9BVL4 669 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 ADAM22Q9P0K1 906 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 DKK4Q9UBT3 224 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 NEU3Q9UQ49 428 aa17.4■□□□□ 0.38
TRIM39-209ENST00000428728 LGALS16A8MUM7 142 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 TRIM38O00635 465 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 SIGLEC6O43699 453 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 CD160O95971 181 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 KRT3P12035 628 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 UNGP13051 313 aaPredicted RBP17.39■□□□□ 0.37
TRIM39-209ENST00000428728 RHOQP17081 205 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 CKMT2P17540 419 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 GPD1P21695 349 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 L1CAMP32004 1257 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 GKP32189 559 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 MAPKAPK2P49137 400 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 MYL5Q02045 173 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 NRG1Q02297 640 aaPredicted RBP17.39■□□□□ 0.37
TRIM39-209ENST00000428728 CLEC16AQ2KHT3 1053 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 TMEM259Q4ZIN3 620 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 SASS6Q6UVJ0 657 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 NLRP14Q86W24 1093 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 ZNF354CQ86Y25 554 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 SLC22A18ASQ8N1D0 253 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 ARHGEF2Q92974 986 aaKnown RBP17.39■□□□□ 0.37
TRIM39-209ENST00000428728 OSBPL2Q9H1P3 480 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 TMEM248Q9NWD8 314 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 UCKL1Q9NWZ5 548 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 HECAQ9UBI9 543 aaPredicted RBP17.39■□□□□ 0.37
TRIM39-209ENST00000428728 DAAM1Q9Y4D1 1078 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 FADS3Q9Y5Q0 445 aa17.39■□□□□ 0.37
TRIM39-209ENST00000428728 A6NNZ2 444 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 RAMP2O60895 175 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 CALB1P05937 261 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 PLEKP08567 350 aaPredicted RBP17.38■□□□□ 0.37
TRIM39-209ENST00000428728 CDK4P11802 303 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 DGKAP23743 735 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 RFC1P35251 1148 aaPredicted RBP17.38■□□□□ 0.37
TRIM39-209ENST00000428728 DAB2P98082 770 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 UBXN1Q04323 297 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 FGL2Q14314 439 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 STX1AQ16623 288 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 PROX2Q3B8N5 592 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 HS1BP3Q53T59 392 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 KIAA1161Q6NSJ0 714 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 ABI3BPQ7Z7G0 1075 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 SLC25A45Q8N413 288 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 NXPE2Q96DL1 559 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 DCBLD2Q96PD2 775 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 GBP4Q96PP9 640 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 KLHL11Q9NVR0 708 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 ANO10Q9NW15 660 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 HPCAL4Q9UM19 191 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 ITM2BQ9Y287 266 aa17.38■□□□□ 0.37
TRIM39-209ENST00000428728 DSPP15924 2871 aaKnown RBP17.37■□□□□ 0.37
TRIM39-209ENST00000428728 KRIT1O00522 736 aa17.37■□□□□ 0.37
TRIM39-209ENST00000428728 RAD51BO15315 384 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms