RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 UNGP13051 313 aaPredicted RBP15.83■□□□□ 0.12
SEC13-210ENST00000428626 SOX5P35711 763 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 CCNHP51946 323 aaPredicted RBP15.83■□□□□ 0.12
SEC13-210ENST00000428626 HDAC4P56524 1084 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 CT47A1Q5JQC4 288 aaPredicted RBP15.83■□□□□ 0.12
SEC13-210ENST00000428626 HES3Q5TGS1 186 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 NEK5Q6P3R8 708 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 ZNF783Q6ZMS7 281 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 LEKR1Q6ZMV7 388 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 CLEC17AQ6ZS10 378 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 RBM43Q6ZSC3 357 aaKnown RBP15.83■□□□□ 0.12
SEC13-210ENST00000428626 PDZD3Q86UT5 571 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 ZNF677Q86XU0 584 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 CCDC185Q8N715 623 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 BMFQ96LC9 184 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 CCDC114Q96M63 670 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 FANCLQ9NW38 375 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 OR12D3Q9UGF7 316 aa15.83■□□□□ 0.12
SEC13-210ENST00000428626 FARP1Q9Y4F1 1045 aaPredicted RBP15.83■□□□□ 0.12
SEC13-210ENST00000428626 SPINT1O43278 529 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 MAGEC1O60732 1142 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 LRIG2O94898 1065 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 PCDH8O95206 1070 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 C1SP09871 688 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 ADRB3P13945 408 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 JUPP14923 745 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 CKMT2P17540 419 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 DGKAP23743 735 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 DNA2P51530 1060 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 NRG1Q02297 640 aaPredicted RBP15.82■□□□□ 0.12
SEC13-210ENST00000428626 TARDBPQ13148 414 aaKnown RBP eCLIP15.82■□□□□ 0.121e-7■■□□□ 14.1
SEC13-210ENST00000428626 COL9A2Q14055 689 aaPredicted RBP15.82■□□□□ 0.12
SEC13-210ENST00000428626 CARD16Q5EG05 197 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 TPRG1LQ5T0D9 272 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 ACBD5Q5T8D3 534 aaPredicted RBP15.82■□□□□ 0.12
SEC13-210ENST00000428626 RETSATQ6NUM9 610 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 PARS2Q7L3T8 475 aaKnown RBP15.82■□□□□ 0.12
SEC13-210ENST00000428626 ABI3BPQ7Z7G0 1075 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 PCDH20Q8N6Y1 951 aaKnown RBP15.82■□□□□ 0.12
SEC13-210ENST00000428626 MSANTD4Q8NCY6 345 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 OR6K2Q8NGY2 324 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 CENPIQ92674 756 aaPredicted RBP15.82■□□□□ 0.12
SEC13-210ENST00000428626 ARHGEF2Q92974 986 aaKnown RBP15.82■□□□□ 0.12
SEC13-210ENST00000428626 HEPHQ9BQS7 1158 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 TM6SF2Q9BZW4 377 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 CEP44Q9C0F1 390 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 GPR27Q9NS67 375 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 KLHL11Q9NVR0 708 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 DNAI1Q9UI46 699 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 GGT7Q9UJ14 662 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 FADS3Q9Y5Q0 445 aa15.82■□□□□ 0.12
SEC13-210ENST00000428626 BPTFQ12830 3046 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 POM121BA6NF01 834 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 MYF5P13349 255 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 HNRNPA2B1P22626 353 aaKnown RBP15.81■□□□□ 0.12
SEC13-210ENST00000428626 ITGB7P26010 798 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 SDC4P31431 198 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 L1CAMP32004 1257 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 RFC1P35251 1148 aaPredicted RBP15.81■□□□□ 0.12
SEC13-210ENST00000428626 ABL2P42684 1182 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 PTPN9P43378 593 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 NEK3P51956 506 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 SLC20A2Q08357 652 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 ZNF542PQ5EBM4 170 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 PYROXD2Q8N2H3 581 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 NETO2Q8NC67 525 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 CALN1Q9BXU9 219 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 OSBPL2Q9H1P3 480 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 NOL6Q9H6R4 1146 aaKnown RBP15.81■□□□□ 0.12
SEC13-210ENST00000428626 DYRK4Q9NR20 520 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 TMEM51Q9NW97 253 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 TMEM248Q9NWD8 314 aa15.81■□□□□ 0.12
SEC13-210ENST00000428626 PTPRQQ9UMZ3 2332 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 A0A087WV48 116 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 LY6G6EA0A0G2JKS1 128 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 TCRBV5S1A1TA0A578 114 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 FFAR2O15552 330 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 TLX3O43711 291 aaPredicted RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 PIAS2O75928 621 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 PAK4O96013 591 aaPredicted RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 RHOQP17081 205 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 ACP1P24666 158 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 AKT2P31751 481 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 RECQLP46063 649 aaPredicted RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 COPB1P53618 953 aaKnown RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 INSM1Q01101 510 aaPredicted RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 ZNF211Q13398 564 aaPredicted RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 SYCP1Q15431 976 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 SOWAHCQ53LP3 525 aaPredicted RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 RWDD4Q6NW29 188 aaKnown RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 WDR59Q6PJI9 974 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 Q6ZSR6 202 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 STRADAQ7RTN6 431 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 APTXQ7Z2E3 356 aaKnown RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 FAM172AQ8WUF8 416 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 BBC3Q96PG8 261 aaPredicted RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 KLF6Q99612 283 aaPredicted RBP15.8■□□□□ 0.12
SEC13-210ENST00000428626 SLC17A9Q9BYT1 436 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 KLC2Q9H0B6 622 aa15.8■□□□□ 0.12
SEC13-210ENST00000428626 HSD3B7Q9H2F3 369 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms