RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 KCNH1O95259 989 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 LDLRP01130 860 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 ETS1P14921 441 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 H2AFXP16104 143 aaPredicted RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 KELP23276 732 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 HOXC12P31275 282 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 PFKPQ01813 784 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 ITIH4Q14624 930 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 NLGN2Q8NFZ4 835 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 EPS8L3Q8TE67 593 aaKnown RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 PURBQ96QR8 312 aaKnown RBP9.05□□□□□ -0.96
CTNND1-208ENST00000428599 SYT17Q9BSW7 474 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 WDR18Q9BV38 432 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 FTHL17Q9BXU8 183 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 CORO2BQ9UQ03 480 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 USP20Q9Y2K6 914 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 PIK3C2AO00443 1686 aa9.05□□□□□ -0.96
CTNND1-208ENST00000428599 TAF4O00268 1085 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 SH3BGRLO75368 114 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 PDE5AO76074 875 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 CLUP10909 449 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 POLD2P49005 469 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 SRSF11Q05519 484 aaKnown RBP9.04□□□□□ -0.96
CTNND1-208ENST00000428599 DDI2Q5TDH0 399 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 PLEKHA7Q6IQ23 1121 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 GPR142Q7Z601 462 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 ARMC8Q8IUR7 673 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 LRRC49Q8IUZ0 686 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 ABRAQ8N0Z2 381 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 CCDC185Q8N715 623 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 FERD3LQ96RJ6 166 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 REEP1Q9H902 201 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 COMMD9Q9P000 198 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 KLF15Q9UIH9 416 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 TFR2Q9UP52 801 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 ANGPT4Q9Y264 503 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 A0A0B4J269 797 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 MAGEC1O60732 1142 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 MFN2O95140 757 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 SERPINE1P05121 402 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 ASGR1P07306 291 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 CYP3A4P08684 503 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 BGNP21810 368 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 BDNFP23560 247 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 PPM1AP35813 382 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 GSSP48637 474 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 CDC42P60953 191 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 RASA2Q15283 850 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 TMEM119Q4V9L6 283 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 CELF3Q5SZQ8 465 aaKnown RBP9.04□□□□□ -0.96
CTNND1-208ENST00000428599 N4BP2L1Q5TBK1 243 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-208ENST00000428599 SV2AQ7L0J3 742 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 EIF3MQ7L2H7 374 aaKnown RBP9.04□□□□□ -0.96
CTNND1-208ENST00000428599 GPR135Q8IZ08 494 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.04□□□□□ -0.963e-6■□□□□ 9.8
CTNND1-208ENST00000428599 ANKRD26Q9UPS8 1709 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 ISM1B1AKI9 464 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 PRODHO43272 600 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 SCN2BO60939 215 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 FKBP6O75344 327 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 RBMXL2O75526 392 aaKnown RBP9.04□□□□□ -0.96
CTNND1-208ENST00000428599 IL1BP01584 269 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 NOGQ13253 232 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 MYBPC2Q14324 1141 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 LRRC34Q8IZ02 419 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 KIAA0895Q8NCT3 520 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 MDM1Q8TC05 714 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 SLC2A14Q8TDB8 520 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 TKTL2Q9H0I9 626 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 LMAN2LQ9H0V9 348 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 PCDH9Q9HC56 1237 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 ELOVL2Q9NXB9 296 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 FRMPD4Q14CM0 1322 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 ZNF541Q9H0D2 1346 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 SLC15A5A6NIM6 579 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 TLL1O43897 1013 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 VAPBO95292 243 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 ADH1CP00326 375 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 MT-CO1P00395 513 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 PAEPP09466 180 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 CSH1P0DML2 217 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 CSH2P0DML3 217 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 PSEN1P49768 467 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 SMIM11AP58511 58 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 MSLNQ13421 630 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-208ENST00000428599 INO80DQ53TQ3 878 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-208ENST00000428599 LIN54Q6MZP7 749 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 CXCL17Q6UXB2 119 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 DET1Q7L5Y6 550 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 ITFG1Q8TB96 612 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 RORBQ92753 470 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 SLC38A2Q96QD8 506 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 MLPHQ9BV36 600 aaPredicted RBP9.04□□□□□ -0.96
CTNND1-208ENST00000428599 POMKQ9H5K3 350 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 PTPRHQ9HD43 1115 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 INPP4BO15327 924 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 USP17L7P0C7H9 530 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 HDCP19113 662 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 EPORP19235 508 aa9.04□□□□□ -0.96
CTNND1-208ENST00000428599 MGAT1P26572 445 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms