RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 RXFP3Q9NSD7 469 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 HS3ST2Q9Y278 367 aa16■□□□□ 0.15
CLK3P2-201ENST00000427566 GVINP1Q7Z2Y8 2422 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 ZNF292O60281 2723 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 LRRD1A4D1F6 860 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 FAM47DPA6NHR8 397 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 MID1O15344 667 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 ATP9BO43861 1147 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 FOXD2O60548 495 aaPredicted RBP15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 IL1BP01584 269 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 CFIP05156 583 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 ZNF135P52742 658 aaPredicted RBP15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 ZBTB16Q05516 673 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 SERINC3Q13530 473 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 CST6Q15828 149 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 ANKRD20A8PQ5CZ79 823 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 TRIM61Q5EBN2 209 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 SYCP2LQ5T4T6 812 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 AFMIDQ63HM1 303 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 ZNF662Q6ZS27 426 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 Q6ZVU0 165 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 RHOT1Q8IXI2 618 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 LRRC57Q8N9N7 239 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 KRT35Q92764 455 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 FOXJ1Q92949 421 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 RNF25Q96BH1 459 aaPredicted RBP15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 OMDQ99983 421 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 FBXL12Q9NXK8 326 aa15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 TP53BP1Q12888 1972 aaPredicted RBP15.99■□□□□ 0.15
CLK3P2-201ENST00000427566 A0A1W2PP55 124 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 J3KR12 359 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 KDELR3O43731 214 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 ZNF821O75541 412 aaPredicted RBP15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 RNASEH2AO75792 299 aaKnown RBP15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 SLC8A1P32418 973 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 ACSL1P33121 698 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 PAPOLAP51003 745 aaKnown RBP15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 NDST2P52849 883 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 YBEYP58557 167 aaPredicted RBP15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 PDK2Q15119 407 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 LLGL1Q15334 1064 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 LRRC38Q5VT99 294 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 DCAF12L1Q5VU92 463 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 PQLC3Q8N755 202 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 NETO1Q8TDF5 533 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 OR8D1Q8WZ84 308 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 FAF2Q96CS3 445 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 ZNF419Q96HQ0 510 aaPredicted RBP15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 FAM129BQ96TA1 746 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 EDEM2Q9BV94 578 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 NUSAP1Q9BXS6 441 aaKnown RBP15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 BTBD1Q9H0C5 482 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 TNKS2Q9H2K2 1166 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 PABPC3Q9H361 631 aaKnown RBP15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 PILRBQ9UKJ0 227 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 GUCA1BQ9UMX6 200 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 FCF1Q9Y324 198 aaKnown RBP15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 CAPN6Q9Y6Q1 641 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 PLXNA2O75051 1894 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 CFAP54Q96N23 3096 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 WDR87Q6ZQQ6 2873 aa15.98■□□□□ 0.15
CLK3P2-201ENST00000427566 DFFAO00273 331 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 KIF5CO60282 957 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 PALMO75781 387 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 MAP3K6O95382 1288 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 KRT1P04264 644 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 CASQ1P31415 396 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 ETFBP38117 255 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 DPP6P42658 865 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 SERPINH1P50454 418 aaKnown RBP15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 VASPP50552 380 aaPredicted RBP15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 GNG11P61952 73 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 IRX4P78413 519 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 SFSWAPQ12872 951 aaKnown RBP15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 ELAVL3Q14576 367 aaKnown RBP15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 POM121L1PQ3SYA9 428 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 PARP15Q460N3 678 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 WDR45BQ5MNZ6 344 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 NCBP2-AS2Q69YL0 99 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 RETSATQ6NUM9 610 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 TMCO3Q6UWJ1 677 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 MFSD7Q6UXD7 560 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 HDDC3Q8N4P3 179 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 LRRN4Q8WUT4 740 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 ZNF670Q9BS34 389 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 FSCN3Q9NQT6 498 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 RCOR3Q9P2K3 495 aaPredicted RBP15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 SCML1Q9UN30 329 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 FARP1Q9Y4F1 1045 aaPredicted RBP15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 RNF103O00237 685 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 MFSD11O43934 449 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 SEMA4FO95754 770 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 IGLV3-19P01714 112 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 SDHBP21912 280 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 KCNA4P22459 653 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 DNA2P51530 1060 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 PUM1Q14671 1186 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 DUOXA1Q1HG43 343 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 C22orf39Q6P5X5 142 aa15.97■□□□□ 0.15
CLK3P2-201ENST00000427566 DSG4Q86SJ6 1040 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms