RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 LRRC40Q9H9A6 602 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 SP110Q9HB58 689 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 CASS4Q9NQ75 786 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 DNMT3BQ9UBC3 853 aaKnown RBP18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 ZC3H7BQ9UGR2 993 aaKnown RBP18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 TBC1D30Q9Y2I9 924 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 NOTCH4Q99466 2003 aa18.26■□□□□ 0.51
AC055811.2-201ENST00000427497 ILVBLA1L0T0 632 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 SDR42E2A6NKP2 422 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 PRAMEF11O60813 436 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 NR1D1P20393 614 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 DDX6P26196 483 aaKnown RBP eCLIP18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 HOXD9P28356 352 aaPredicted RBP18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 MAGOHP61326 146 aaKnown RBP18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 SPARCL1Q14515 664 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 KDM7AQ6ZMT4 941 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 SETD3Q86TU7 594 aaPredicted RBP18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 TDRD5Q8NAT2 981 aaKnown RBP18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 LEMD2Q8NC56 503 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 PDFQ9HBH1 243 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 ZDHHC7Q9NXF8 308 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 DPP7Q9UHL4 492 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 LSM7Q9UK45 103 aaKnown RBP18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 AAR2Q9Y312 384 aaKnown RBP18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 TCRBV9S1A1TA0A576 114 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 SOBPA7XYQ1 873 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 TSPAN3O60637 253 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 ANXA9O76027 345 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 CPP00450 1065 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 C1QAP02745 245 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 RHOP08100 348 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 SLC10A7Q0GE19 358 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 MARC1Q5VT66 337 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 ELMSAN1Q6PJG2 1045 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 PBXIP1Q96AQ6 731 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 TCEAL4Q96EI5 215 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 ZNF599Q96NL3 588 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 XPO6Q96QU8 1125 aaKnown RBP18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 CFAP97Q9P2B7 532 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 CTNNAL1Q9UBT7 734 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 SLC24A2Q9UI40 661 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 ARHGAP26Q9UNA1 814 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 ZNF510Q9Y2H8 683 aa18.25■□□□□ 0.51
AC055811.2-201ENST00000427497 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 A0A0D9SEW6 157 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 XYLBO75191 536 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 SKOR1P84550 965 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 GABPB1Q06547 395 aaPredicted RBP18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 ZNF177Q13360 481 aaPredicted RBP18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 OLIG2Q13516 323 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 KLHL38Q2WGJ6 581 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 STEAP4Q687X5 459 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 CXorf57Q6NSI4 855 aaKnown RBP18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 UNC5AQ6ZN44 842 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 PLCD3Q8N3E9 789 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 CPXM2Q8N436 756 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 HJURPQ8NCD3 748 aaPredicted RBP18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 OR52K1Q8NGK4 314 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 SPATA22Q8NHS9 363 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 STAMBPL1Q96FJ0 436 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 ASIC4Q96FT7 647 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 CFAP36Q96G28 342 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 DHRS4Q9BTZ2 278 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 SLC25A51Q9H1U9 297 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 TTLL3Q9Y4R7 772 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 MAD1L1Q9Y6D9 718 aa18.24■□□□□ 0.51
AC055811.2-201ENST00000427497 CCDC195A0A1B0GUA6 201 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 USP12O75317 370 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 MGAT1P26572 445 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 STX2P32856 288 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 GEMP55040 296 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 GEMIN4P57678 1058 aaKnown RBP18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 SESN2P58004 480 aaPredicted RBP18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 PRSS36Q5K4E3 855 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 GPR158Q5T848 1215 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 TMCO4Q5TGY1 634 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 NAPEPLDQ6IQ20 393 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 ZNF783Q6ZMS7 281 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 LINC00523Q86TU6 105 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 ZNF354CQ86Y25 554 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 CCNJLQ8IV13 435 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 OR7D4Q8NG98 312 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 NSMCE1Q8WV22 266 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 ZNF707Q96C28 371 aaPredicted RBP18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 CYTH2Q99418 400 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 NAT9Q9BTE0 207 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 ACE2Q9BYF1 805 aaPredicted RBP18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 PRKD2Q9BZL6 878 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 TASP1Q9H6P5 420 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 UBP1Q9NZI7 540 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 SORCS3Q9UPU3 1222 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 ZDBF2Q9HCK1 2354 aa18.23■□□□□ 0.51
AC055811.2-201ENST00000427497 POC1B-GALNT4F8VUJ3 575 aa18.22■□□□□ 0.51
AC055811.2-201ENST00000427497 AP3B1O00203 1094 aa18.22■□□□□ 0.51
AC055811.2-201ENST00000427497 LEFTY2O00292 366 aa18.22■□□□□ 0.51
AC055811.2-201ENST00000427497 SCAMP3O14828 347 aaKnown RBP18.22■□□□□ 0.51
AC055811.2-201ENST00000427497 KDELR3O43731 214 aa18.22■□□□□ 0.51
AC055811.2-201ENST00000427497 NEBLO76041 1014 aa18.22■□□□□ 0.51
AC055811.2-201ENST00000427497 PAPLNO95428 1278 aa18.22■□□□□ 0.51
AC055811.2-201ENST00000427497 MT-CYBP00156 380 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms