RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 USP49Q70CQ1 688 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 PCSK9Q8NBP7 692 aaKnown RBP6□□□□□ -1.45
C9orf3-205ENST00000427193 GPT2Q8TD30 523 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 LRRC15Q8TF66 581 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 GLG1Q92896 1179 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 DAZAP1Q96EP5 407 aaKnown RBP6□□□□□ -1.45
C9orf3-205ENST00000427193 SLC35A4Q96G79 324 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 HSD17B14Q9BPX1 270 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 SLC28A3Q9HAS3 691 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 AGO4Q9HCK5 861 aaKnown RBP6□□□□□ -1.45
C9orf3-205ENST00000427193 ANLNQ9NQW6 1124 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 TUBA8Q9NY65 449 aaPredicted RBP6□□□□□ -1.45
C9orf3-205ENST00000427193 DDX25Q9UHL0 483 aaKnown RBP6□□□□□ -1.45
C9orf3-205ENST00000427193 NRBP1Q9UHY1 535 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 NDRG4Q9ULP0 352 aaKnown RBP6□□□□□ -1.45
C9orf3-205ENST00000427193 SHOC2Q9UQ13 582 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 MTCH2Q9Y6C9 303 aa6□□□□□ -1.45
C9orf3-205ENST00000427193 NFASCO94856 1347 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 IGKV6D-21A0A0A0MT36 114 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 SMIM35A0A1B0GVV1 85 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 ASB14A6NK59 587 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 IPO5O00410 1097 aaKnown RBP5.99□□□□□ -1.45
C9orf3-205ENST00000427193 FIBPO43427 364 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 IL33O95760 270 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 CCNE2O96020 404 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 TIMP1P01033 207 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 GRPP07492 148 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 HDCP19113 662 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 MARCKSP29966 332 aaPredicted RBP5.99□□□□□ -1.45
C9orf3-205ENST00000427193 CCND2P30279 289 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 LONP1P36776 959 aaKnown RBP5.99□□□□□ -1.45
C9orf3-205ENST00000427193 TPTEP56180 551 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 UBE2HP62256 183 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 SATB1Q01826 763 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 PPIGQ13427 754 aaKnown RBP eCLIP5.99□□□□□ -1.45
C9orf3-205ENST00000427193 LAMB3Q13751 1172 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 LRRC41Q15345 812 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 STXBP2Q15833 593 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 ARHGEF16Q5VV41 709 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 RBM43Q6ZSC3 357 aaKnown RBP5.99□□□□□ -1.45
C9orf3-205ENST00000427193 Q6ZWC4 215 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 ARMCX2Q7L311 632 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 AK8Q96MA6 479 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 C5orf34Q96MH7 638 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 MACROD1Q9BQ69 325 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 CCSER1Q9C0I3 900 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 MTIF3Q9H2K0 278 aaKnown RBP5.99□□□□□ -1.45
C9orf3-205ENST00000427193 GOLPH3LQ9H4A5 285 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 SARS2Q9NP81 518 aaKnown RBP5.99□□□□□ -1.45
C9orf3-205ENST00000427193 TCHHQ07283 1943 aa5.99□□□□□ -1.45
C9orf3-205ENST00000427193 MYH15Q9Y2K3 1946 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 KCNU1A8MYU2 1149 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 CTAGE5O15320 804 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 PQBP1O60828 265 aaKnown RBP5.98□□□□□ -1.45
C9orf3-205ENST00000427193 STBD1O95210 358 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 LYPLA2O95372 231 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 DLDP09622 509 aaKnown RBP5.98□□□□□ -1.45
C9orf3-205ENST00000427193 MUTP22033 750 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 UBA1P22314 1058 aaKnown RBP5.98□□□□□ -1.45
C9orf3-205ENST00000427193 AKAP5P24588 427 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 KCNJ5P48544 419 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 CEBPZQ03701 1054 aaKnown RBP5.98□□□□□ -1.45
C9orf3-205ENST00000427193 DAZAP2Q15038 168 aaPredicted RBP5.98□□□□□ -1.45
C9orf3-205ENST00000427193 STK38Q15208 465 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 CALCRLQ16602 461 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 KLHL40Q2TBA0 621 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 TMEM63BQ5T3F8 832 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 PSRC1Q6PGN9 363 aaPredicted RBP5.98□□□□□ -1.45
C9orf3-205ENST00000427193 ANKRD33Q7Z3H0 272 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 PLA2G4DQ86XP0 818 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 CCAR1Q8IX12 1150 aaKnown RBP5.98□□□□□ -1.45
C9orf3-205ENST00000427193 PRSS33Q8NF86 280 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 ABHD11Q8NFV4 315 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 RDM1Q8NG50 284 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 SPATA20Q8TB22 786 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 XAGE5Q8WWM1 108 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 GJA10Q969M2 543 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 R3HDM4Q96D70 268 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 MTFMTQ96DP5 389 aaKnown RBP5.98□□□□□ -1.45
C9orf3-205ENST00000427193 HSPBAP1Q96EW2 488 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 MVB12AQ96EY5 273 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 EPSTI1Q96J88 318 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 CDK5RAP3Q96JB5 506 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 CDHR1Q96JP9 859 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 RITA1Q96K30 269 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 TMEM79Q9BSE2 394 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 GTPBP4Q9BZE4 634 aaKnown RBP5.98□□□□□ -1.45
C9orf3-205ENST00000427193 VPS16Q9H269 839 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 ABHD16BQ9H3Z7 469 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 TTC12Q9H892 705 aaPredicted RBP5.98□□□□□ -1.45
C9orf3-205ENST00000427193 TBC1D22BQ9NU19 505 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 ELOVL5Q9NYP7 299 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 TBX21Q9UL17 535 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 DMDP11532 3685 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 GBF1Q92538 1859 aa5.98□□□□□ -1.45
C9orf3-205ENST00000427193 FASNP49327 2511 aaKnown RBP5.97□□□□□ -1.45
C9orf3-205ENST00000427193 VWA3AA6NCI4 1184 aa5.97□□□□□ -1.45
C9orf3-205ENST00000427193 PP2D1A8MPX8 630 aa5.97□□□□□ -1.45
C9orf3-205ENST00000427193 POC1B-GALNT4F8VUJ3 575 aa5.97□□□□□ -1.45
C9orf3-205ENST00000427193 SEPT4O43236 478 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms