RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 BCLAF3A2AJT9 711 aaKnown RBP13.58□□□□□ -0.24
USP42-203ENST00000426246 KCNU1A8MYU2 1149 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 TOMM70O94826 608 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 STAMBPO95630 424 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 VCLP18206 1134 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 CDH5P33151 784 aaPredicted RBP13.58□□□□□ -0.24
USP42-203ENST00000426246 ALDH1A3P47895 512 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 CYLC2Q14093 348 aaPredicted RBP13.58□□□□□ -0.24
USP42-203ENST00000426246 PCBP1Q15365 356 aaKnown RBP eCLIP13.58□□□□□ -0.24
USP42-203ENST00000426246 ZBTB6Q15916 424 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 ANKRD20A4Q4UJ75 823 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 SLC27A1Q6PCB7 646 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 GPRIN1Q7Z2K8 1008 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 NAT16Q8N8M0 369 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 OR52K2Q8NGK3 314 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 ZNF398Q8TD17 642 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 KATNAL1Q9BW62 490 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 SIRPGQ9P1W8 387 aa13.58□□□□□ -0.24
USP42-203ENST00000426246 HEMK1Q9Y5R4 338 aaPredicted RBP13.58□□□□□ -0.24
USP42-203ENST00000426246 BNIP3LO60238 219 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 FOXD2O60548 495 aaPredicted RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 PGK1P00558 417 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 ITGAXP20702 1163 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 ATICP31939 592 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 ZBTB17Q13105 803 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 UBXN11Q5T124 520 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 SMYD5Q6GMV2 418 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 NET1Q7Z628 596 aaPredicted RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 OSTM1Q86WC4 334 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 CCDC106Q9BWC9 280 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 NOD1Q9Y239 953 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 EFR3BQ9Y2G0 817 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 PRG3Q9Y2Y8 225 aaPredicted RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 CDY2AQ9Y6F7 541 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 CDY1Q9Y6F8 540 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 C17orf102A2RUQ5 167 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 SEPT4O43236 478 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 SNUPNO95149 360 aaKnown RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 DHRS4L1P0CG22 281 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 PIK3R1P27986 724 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 MATKP42679 507 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 SATB1Q01826 763 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 KYAT1Q16773 422 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 SLC9A4Q6AI14 798 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 MAVSQ7Z434 540 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 MYO1HQ8N1T3 1032 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 ENDOVQ8N8Q3 282 aaKnown RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 DHRS4Q9BTZ2 278 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 ZDHHC2Q9UIJ5 367 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 MTF2Q9Y483 593 aaPredicted RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 FAM159BA6NKW6 160 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 PTPN1P18031 435 aaKnown RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 CCND3P30281 292 aaPredicted RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 SCNN1GP51170 649 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 IL1RL1Q01638 556 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 DCAF4L1Q3SXM0 396 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 FOXB2Q5VYV0 432 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 BNC2Q6ZN30 1099 aaPredicted RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 PDZD4Q76G19 769 aaPredicted RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 NPWQ8N729 165 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 ATP6V1E2Q96A05 226 aa13.57□□□□□ -0.24
USP42-203ENST00000426246 RBM22Q9NW64 420 aaKnown RBP eCLIP13.57□□□□□ -0.24
USP42-203ENST00000426246 ABI2Q9NYB9 513 aaPredicted RBP13.57□□□□□ -0.24
USP42-203ENST00000426246 A6NHS1 94 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 TFEBP19484 476 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 PRKCHP24723 683 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 GRIK1P39086 918 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 PLOD1Q02809 727 aaPredicted RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 PTK2BQ14289 1009 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 PPP1R3AQ16821 1122 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 ARL13BQ3SXY8 428 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 KYAT3Q6YP21 454 aaKnown RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 KYQ8NBH2 561 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 KLHDC9Q8NEP7 349 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 BLOC1S5Q8TDH9 187 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 EXOC2Q96KP1 924 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 CAPNS2Q96L46 248 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 SNX27Q96L92 541 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 SPON2Q9BUD6 331 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 SLC4A5Q9BY07 1137 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 FBRSL1Q9HCM7 1045 aaKnown RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 NT5MQ9NPB1 228 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 MTMR10Q9NXD2 777 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 CNTN3Q9P232 1028 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 GTF2IRD1Q9UHL9 959 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 CDYLQ9Y232 598 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 PTGDR2Q9Y5Y4 395 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 RNF103-CHMP3A0A140T963 221 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 A0A1B0GTW7 788 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 ERI2A8K979 691 aaKnown RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 SERPINB8P50452 374 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 WASHC5Q12768 1159 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 KRT72Q14CN4 511 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 CXCL17Q6UXB2 119 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 RBM44Q6ZP01 1051 aaKnown RBP13.56□□□□□ -0.24
USP42-203ENST00000426246 DSELQ8IZU8 1212 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 ATPAF2Q8N5M1 289 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 CIB1Q99828 191 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 POMKQ9H5K3 350 aa13.56□□□□□ -0.24
USP42-203ENST00000426246 WDR41Q9HAD4 459 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms