RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 DDX50Q9BQ39 737 aaKnown RBP26.9■■□□□ 1.9
LDB1-202ENST00000425280 ATXN3LQ9H3M9 355 aa26.9■■□□□ 1.9
LDB1-202ENST00000425280 HDCP19113 662 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 TAC1P20366 129 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 CTNNB1P35222 781 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 CCNFP41002 786 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 ZXDBP98169 803 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 CYP4F8P98187 520 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 POU6F1Q14863 301 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 TIFABQ6ZNK6 161 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 ARRDC2Q8TBH0 407 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 SEC16BQ96JE7 1060 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 ZNF778Q96MU6 729 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 ZNF599Q96NL3 588 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 MCOLN1Q9GZU1 580 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 VPS45Q9NRW7 570 aa26.89■■□□□ 1.9
LDB1-202ENST00000425280 A0A1B0GVM2 712 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 TTC24A2A3L6 582 aaPredicted RBP26.89■■□□□ 1.89
LDB1-202ENST00000425280 TCAF2A6NFQ2 919 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 GREM1O60565 184 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 CSPG5O95196 566 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 ADRA1DP25100 572 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 CHRNA4P43681 627 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 GKAP1Q5VSY0 366 aaPredicted RBP26.89■■□□□ 1.89
LDB1-202ENST00000425280 PKN3Q6P5Z2 889 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 TADA1Q96BN2 335 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 ATP13A1Q9HD20 1204 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 LZTS1Q9Y250 596 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 IRAK3Q9Y616 596 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 CPQQ9Y646 472 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 MYLKQ15746 1914 aa26.89■■□□□ 1.89
LDB1-202ENST00000425280 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.88■■□□□ 1.89
LDB1-202ENST00000425280 LATS1O95835 1130 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 ZNF177Q13360 481 aaPredicted RBP26.88■■□□□ 1.89
LDB1-202ENST00000425280 IL31Q6EBC2 164 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 POTEHQ6S545 545 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 PIGWQ7Z7B1 504 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 PHOSPHO2Q8TCD6 241 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 CPNE1Q99829 537 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 EMILIN2Q9BXX0 1053 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 NSRP1Q9H0G5 558 aaKnown RBP26.88■■□□□ 1.89
LDB1-202ENST00000425280 ARNT2Q9HBZ2 717 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 FGFR1OP2Q9NVK5 253 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 DENND4CQ5VZ89 1909 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 ILVBLA1L0T0 632 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 HIDE1A8MVS5 230 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 SCAMP3O14828 347 aaKnown RBP26.88■■□□□ 1.89
LDB1-202ENST00000425280 RHOCP08134 193 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 SYN1P17600 705 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 SEPT7Q16181 437 aaKnown RBP26.88■■□□□ 1.89
LDB1-202ENST00000425280 PDK4Q16654 411 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 TEDDM1Q5T9Z0 273 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 KCNMB4Q86W47 210 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 SPON2Q9BUD6 331 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 C20orf96Q9NUD7 363 aaPredicted RBP26.88■■□□□ 1.89
LDB1-202ENST00000425280 TBC1D30Q9Y2I9 924 aa26.88■■□□□ 1.89
LDB1-202ENST00000425280 MIA3Q5JRA6 1907 aa26.87■■□□□ 1.89
LDB1-202ENST00000425280 CCDC78A2IDD5 438 aa26.87■■□□□ 1.89
LDB1-202ENST00000425280 COPEO14579 308 aa26.87■■□□□ 1.89
LDB1-202ENST00000425280 MUSKO15146 869 aa26.87■■□□□ 1.89
LDB1-202ENST00000425280 DNAJB1P25685 340 aa26.87■■□□□ 1.89
LDB1-202ENST00000425280 GP5P40197 560 aa26.87■■□□□ 1.89
LDB1-202ENST00000425280 HSP90AA5PQ58FG0 334 aa26.87■■□□□ 1.89
LDB1-202ENST00000425280 PLPP4Q5VZY2 271 aa26.87■■□□□ 1.89
LDB1-202ENST00000425280 SETD3Q86TU7 594 aaPredicted RBP26.87■■□□□ 1.89
LDB1-202ENST00000425280 PPHLN1Q8NEY8 458 aaKnown RBP26.87■■□□□ 1.89
LDB1-202ENST00000425280 MRPS31Q92665 395 aaKnown RBP26.87■■□□□ 1.89
LDB1-202ENST00000425280 SRPK1Q96SB4 655 aaKnown RBP26.87■■□□□ 1.89
LDB1-202ENST00000425280 AGAP2Q99490 1192 aa26.87■■□□□ 1.89
LDB1-202ENST00000425280 C2orf71A6NGG8 1288 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 KDELR3O43731 214 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 ZNF235Q14590 738 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 Q6ZNB5 142 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 SLC25A41Q8N5S1 370 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 MRPL43Q8N983 215 aaKnown RBP26.86■■□□□ 1.89
LDB1-202ENST00000425280 POLR1EQ9GZS1 481 aaKnown RBP26.86■■□□□ 1.89
LDB1-202ENST00000425280 MKS1Q9NXB0 559 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 TXNDC16Q9P2K2 825 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 TCAF1Q9Y4C2 921 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 ACTL7AQ9Y615 435 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 NRG2O14511 850 aaPredicted RBP26.86■■□□□ 1.89
LDB1-202ENST00000425280 GLUD1P00367 558 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 GLDCP23378 1020 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 ETV4P43268 484 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 OXCT1P55809 520 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 DNAJC3Q13217 504 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 GRTP1Q5TC63 336 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 CXorf57Q6NSI4 855 aaKnown RBP26.86■■□□□ 1.89
LDB1-202ENST00000425280 RGS9BPQ6ZS82 235 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 CDHR3Q6ZTQ4 885 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 CACNA2D3Q8IZS8 1091 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 MAB21L3Q8N8X9 362 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 PTCD2Q8WV60 388 aaKnown RBP26.86■■□□□ 1.89
LDB1-202ENST00000425280 SEMA3CQ99985 751 aa26.86■■□□□ 1.89
LDB1-202ENST00000425280 ELAC2Q9BQ52 826 aaKnown RBP26.86■■□□□ 1.89
LDB1-202ENST00000425280 MRM3Q9HC36 420 aaKnown RBP26.86■■□□□ 1.89
LDB1-202ENST00000425280 LAMA2P24043 3122 aaKnown RBP26.86■■□□□ 1.89
LDB1-202ENST00000425280 GJB3O75712 270 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 ITGA2BP08514 1039 aa26.85■■□□□ 1.89
LDB1-202ENST00000425280 ALADP13716 330 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms