RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 NEK3P51956 506 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 PFN3P60673 137 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 EIF2B5Q13144 721 aaKnown RBP17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 MAPK8IP2Q13387 824 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 PDE1CQ14123 709 aaPredicted RBP17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 USP53Q70EK8 1073 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 RRAGAQ7L523 313 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 C14orf80Q86SX3 495 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 SLC35F3Q8IY50 421 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 DEFB106AQ8N104 65 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 ASB12Q8WXK4 309 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 SNX21Q969T3 373 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 SGF29Q96ES7 293 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 SPATA32Q96LK8 384 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 TBATAQ96M53 351 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 C1QTNF2Q9BXJ5 285 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 FAM204AQ9H8W3 233 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 ASNSD1Q9NWL6 643 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 SPASTQ9UBP0 616 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 VPS51Q9UID3 782 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 FADS3Q9Y5Q0 445 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 WASF2Q9Y6W5 498 aa17.09■□□□□ 0.33
CHCHD3-202ENST00000423635 FPGTO14772 594 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 CASC3O15234 703 aaKnown RBP17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 ZNF821O75541 412 aaPredicted RBP17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 GCATO75600 419 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 CNTN5O94779 1100 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 ZNF202O95125 648 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 ADRB3P13945 408 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 RRM1P23921 792 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 SLC5A2P31639 672 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 LRRC63Q05C16 580 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 CETN1Q12798 172 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 EIF3IQ13347 325 aaKnown RBP17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 SPIDRQ14159 915 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 DRAP1Q14919 205 aaPredicted RBP17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 TPRG1LQ5T0D9 272 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 C6orf132Q5T0Z8 1188 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 ZNF574Q6ZN55 896 aaPredicted RBP17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 DPY19L3Q6ZPD9 716 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 ARHGEF19Q8IW93 802 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 ZNF606Q8WXB4 792 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 CCDC3Q9BQI4 270 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 ARHGAP9Q9BRR9 750 aa17.08■□□□□ 0.32
CHCHD3-202ENST00000423635 AHCTF1Q8WYP5 2266 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 SYNJ2BP-COX16A0A087WUM0 186 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 A0A1W2PQ27 194 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 A0A1W2PQ64 194 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 LMO7DNF2Z398 122 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 PLD2O14939 933 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 MED7O43513 233 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 PAGE1O75459 146 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 ITGB7P26010 798 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 L1CAMP32004 1257 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 C1QBPQ07021 282 aaKnown RBP17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 SGCGQ13326 291 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 ZNF658Q5TYW1 1059 aaPredicted RBP17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 C22orf39Q6P5X5 142 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 SETD3Q86TU7 594 aaPredicted RBP17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 FBXO39Q8N4B4 442 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 DCAF4L2Q8NA75 395 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 EHBP1Q8NDI1 1231 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 GRIN3AQ8TCU5 1115 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 EXTL1Q92935 676 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 KREMEN1Q96MU8 473 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 RMND1Q9NWS8 449 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 COX16Q9P0S2 106 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 PADI4Q9UM07 663 aa17.07■□□□□ 0.32
CHCHD3-202ENST00000423635 TMX2-CTNND1H3BSU7 103 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 YY2O15391 372 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 AFPP02771 609 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 RHOCP08134 193 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 UGT1A5P35504 534 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 RECQLP46063 649 aaPredicted RBP17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 ADKP55263 362 aaKnown RBP17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 NFKB2Q00653 900 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 PTK2BQ14289 1009 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 TGIF1Q15583 401 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 ALFQ53S48 1182 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 EFHC1Q5JVL4 640 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 ZNF683Q8IZ20 524 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 DENND6BQ8NEG7 585 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 TNKS2Q9H2K2 1166 aa17.06■□□□□ 0.32
CHCHD3-202ENST00000423635 A0A0D9SEW6 157 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 TRIM49BA6NDI0 452 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 IGLON5A6NGN9 336 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 DRGXA6NNA5 263 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 NVLO15381 856 aaKnown RBP17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 TSPAN6O43657 245 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 HSF2BPO75031 334 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 NTRK1P04629 796 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 GGCXP38435 758 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 SLC20A2Q08357 652 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 PDCLQ13371 301 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 PRRT3Q5FWE3 981 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 ESRP1Q6NXG1 681 aaKnown RBP17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 LINGO4Q6UY18 593 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 RAB11FIP2Q7L804 512 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 RBFAQ8N0V3 343 aa17.05■□□□□ 0.32
CHCHD3-202ENST00000423635 WDTC1Q8N5D0 677 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms