RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 LMO3Q8TAP4 145 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 CSGALNACT1Q8TDX6 532 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 TRAPPC12Q8WVT3 735 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 NCSTNQ92542 709 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 TMEM18Q96B42 140 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 MASTLQ96GX5 879 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 GFM1Q96RP9 751 aaKnown RBP4.27□□□□□ -1.73
LINC00397-201ENST00000422074 C6orf106Q9H6K1 298 aaPredicted RBP4.27□□□□□ -1.73
LINC00397-201ENST00000422074 ACAD9Q9H845 621 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 RMI1Q9H9A7 625 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 HDAC6Q9UBN7 1215 aa4.27□□□□□ -1.73
LINC00397-201ENST00000422074 MORC2Q9Y6X9 1032 aaPredicted RBP4.27□□□□□ -1.73
LINC00397-201ENST00000422074 TARSL2A2RTX5 802 aaKnown RBP4.26□□□□□ -1.73
LINC00397-201ENST00000422074 DDTLA6NHG4 134 aaPredicted RBP4.26□□□□□ -1.73
LINC00397-201ENST00000422074 FCGR1AP12314 374 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 YWHAQP27348 245 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 GPR12P47775 334 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 GAS1P54826 345 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
LINC00397-201ENST00000422074 ARHGAP8P85298 464 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 TRAF3Q13114 568 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 CUL4BQ13620 913 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 RUNDC3AQ59EK9 446 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 GJB7Q6PEY0 223 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 CCDC174Q6PII3 467 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 SYNE3Q6ZMZ3 975 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 SETD9Q8NE22 299 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 SPPL3Q8TCT6 385 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 PPP1R10Q96QC0 940 aaKnown RBP4.26□□□□□ -1.73
LINC00397-201ENST00000422074 MSTO1Q9BUK6 570 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 ATP8A2Q9NTI2 1148 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 AGO1Q9UL18 857 aaKnown RBP4.26□□□□□ -1.73
LINC00397-201ENST00000422074 DHDHQ9UQ10 334 aa4.26□□□□□ -1.73
LINC00397-201ENST00000422074 BTBD18B2RXH4 712 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 FAM157AC9JC47 383 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 EYA2O00167 538 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 KRT86O43790 486 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 STRNO43815 780 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 KRT38O76015 456 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 DCTDP32321 178 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 RFC1P35251 1148 aaPredicted RBP4.25□□□□□ -1.73
LINC00397-201ENST00000422074 CENPAP49450 140 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 AARSP49588 968 aaKnown RBP eCLIP4.25□□□□□ -1.73
LINC00397-201ENST00000422074 PDLIM4P50479 330 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 KRT81Q14533 505 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 CBWD5Q5RIA9 395 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 FAM83BQ5T0W9 1011 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 PRSS57Q6UWY2 283 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 MON1BQ7L1V2 547 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 C16orf82Q7Z2V1 217 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 ENAHQ8N8S7 591 aaPredicted RBP4.25□□□□□ -1.73
LINC00397-201ENST00000422074 MCPH1Q8NEM0 835 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 ZMIZ2Q8NF64 920 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 OR14A16Q8NHC5 309 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 GOLGA1Q92805 767 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 LTV1Q96GA3 475 aaPredicted RBP4.25□□□□□ -1.73
LINC00397-201ENST00000422074 IL25Q9H293 177 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 ZNF556Q9HAH1 456 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 RASSF1Q9NS23 344 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 KIF17Q9P2E2 1029 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 NLKQ9UBE8 527 aa4.25□□□□□ -1.73
LINC00397-201ENST00000422074 SRRM3A6NNA2 597 aaPredicted RBP4.24□□□□□ -1.73
LINC00397-201ENST00000422074 RRP1P56182 461 aaKnown RBP4.24□□□□□ -1.73
LINC00397-201ENST00000422074 RPL36AP83881 106 aaKnown RBP4.24□□□□□ -1.73
LINC00397-201ENST00000422074 BNC1Q01954 994 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 TRIM14Q14142 442 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 IL13RA2Q14627 380 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 PRAMEF19Q5SWL8 479 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 C9orf57Q5W0N0 161 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 ATG9BQ674R7 924 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 DENND1BQ6P3S1 775 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 Q6ZTC4 211 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 ARMC9Q7Z3E5 817 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 VPS37AQ8NEZ2 397 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 LINS1Q8NG48 757 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 MPHOSPH6Q99547 160 aaKnown RBP4.24□□□□□ -1.73
LINC00397-201ENST00000422074 SLC25A33Q9BSK2 321 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 TLR8Q9NR97 1041 aaKnown RBP4.24□□□□□ -1.73
LINC00397-201ENST00000422074 DERAQ9Y315 318 aa4.24□□□□□ -1.73
LINC00397-201ENST00000422074 A0A096LPK6 155 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 IGLV5-52A0A0A0MRZ9 124 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 DHX16O60231 1041 aaKnown RBP4.23□□□□□ -1.73
LINC00397-201ENST00000422074 KCNJ13O60928 360 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 HNF1BP35680 557 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 ACTR2P61160 394 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 SLC18A2Q05940 514 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 ST3GAL1Q11201 340 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 EFR3AQ14156 821 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 POSTNQ15063 836 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 PLCB4Q15147 1175 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 PDCD2Q16342 344 aaPredicted RBP4.23□□□□□ -1.73
LINC00397-201ENST00000422074 TIGD6Q17RP2 521 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 AP5B1Q2VPB7 878 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 CTXN3Q4LDR2 81 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 EFHC1Q5JVL4 640 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 SH2D4BQ5SQS7 431 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 MOGAT3Q86VF5 341 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 PALB2Q86YC2 1186 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 TCP11L2Q8N4U5 519 aa4.23□□□□□ -1.73
LINC00397-201ENST00000422074 NPLQ9BXD5 320 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms