RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 BOCQ9BWV1 1114 aa10.43□□□□□ -0.74
TNFAIP3-202ENST00000420009 DYRK4Q9NR20 520 aa10.43□□□□□ -0.74
TNFAIP3-202ENST00000420009 RMND1Q9NWS8 449 aa10.43□□□□□ -0.74
TNFAIP3-202ENST00000420009 CCDC187A0A096LP49 1063 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 CASC3O15234 703 aaKnown RBP10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 SPINT1O43278 529 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 SMAD6O43541 496 aaKnown RBP10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 CNTN5O94779 1100 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 TNFSF15O95150 251 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 GLI1P08151 1106 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 ADRB3P13945 408 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 RRM1P23921 792 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 RABIFP47224 123 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 NEK3P51956 506 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 CDH4P55283 916 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 PFN3P60673 137 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 RPS21P63220 83 aaKnown RBP10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 KRT83P78385 493 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 FOXK1P85037 733 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 PNOCQ13519 176 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 DRAP1Q14919 205 aaPredicted RBP10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 NR0B2Q15466 257 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 ZSCAN23Q3MJ62 389 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 LINC00303Q3SY05 128 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 OTUD1Q5VV17 481 aaPredicted RBP10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 CRTC1Q6UUV9 634 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 C14orf80Q86SX3 495 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 ZSCAN30Q86W11 494 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 SLC35F3Q8IY50 421 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 ZNF683Q8IZ20 524 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 DEFB106AQ8N104 65 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 WDR48Q8TAF3 677 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 NAT6Q93015 286 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 LIN37Q96GY3 246 aaPredicted RBP10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 PPP1R16AQ96I34 528 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 TBATAQ96M53 351 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 KLF6Q99612 283 aaPredicted RBP10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 SLC17A9Q9BYT1 436 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 TRIM4Q9C037 500 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 MUC3BQ9H195 1237 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 STARD5Q9NSY2 213 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 ASNSD1Q9NWL6 643 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 IL36AQ9UHA7 158 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 IL17BQ9UHF5 180 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 ACSL6Q9UKU0 697 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 FADS3Q9Y5Q0 445 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 WASF2Q9Y6W5 498 aa10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 TDRD6O60522 2096 aaKnown RBP10.42□□□□□ -0.74
TNFAIP3-202ENST00000420009 SYNJ2BP-COX16A0A087WUM0 186 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 I6L893 689 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 MED7O43513 233 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 AP1G1O43747 822 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 HSF2BPO75031 334 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 PAGE1O75459 146 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 ZNF821O75541 412 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 LEFTY1O75610 366 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 PAK4O96013 591 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 RHOCP08134 193 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 JUNDP17535 347 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 ITGB7P26010 798 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 EIF2B5Q13144 721 aaKnown RBP10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 PDE1CQ14123 709 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 ALFQ53S48 1182 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 XKR5Q6UX68 686 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 LINGO4Q6UY18 593 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 DPY19L3Q6ZPD9 716 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 DENND6BQ8NEG7 585 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 SPATA20Q8TB22 786 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 LMX1AQ8TE12 382 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 ZNF606Q8WXB4 792 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 CEP63Q96MT8 703 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 LENG8Q96PV6 779 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 GSDMAQ96QA5 445 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 CPXM1Q96SM3 734 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 C1QTNF2Q9BXJ5 285 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 SRRTQ9BXP5 876 aaKnown RBP10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 TNKS2Q9H2K2 1166 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 ANLNQ9NQW6 1124 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 COX16Q9P0S2 106 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 PCDHGA7Q9Y5G6 932 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 HEMK1Q9Y5R4 338 aaPredicted RBP10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 RELNP78509 3460 aa10.41□□□□□ -0.74
TNFAIP3-202ENST00000420009 A0A0D9SEW6 157 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 LMO7DNF2Z398 122 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 NTN3O00634 580 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 FPGTO14772 594 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 MUSKO15146 869 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 NOBOXO60393 691 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 GCATO75600 419 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 LETM1O95202 739 aaPredicted RBP10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 ITGB2P05107 769 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 HSP90AA1P07900 732 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 KRT5P13647 590 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 ITGB6P18564 788 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 GNA15P30679 374 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 L1CAMP32004 1257 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 RPIAP49247 311 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 SERPINH1P50454 418 aaKnown RBP10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 CETN1Q12798 172 aa10.4□□□□□ -0.74
TNFAIP3-202ENST00000420009 NME3Q13232 169 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms