RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 NAT16Q8N8M0 369 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 CCDC26Q8TAB7 109 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 USP33Q8TEY7 942 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 RNF139Q8WU17 664 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 PTCHD1Q96NR3 888 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 BBS2Q9BXC9 721 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 NAA15Q9BXJ9 866 aaKnown RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 DCLK3Q9C098 648 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 SEMA4AQ9H3S1 761 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 ABCC13Q9NSE7 274 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 POLR3BQ9NW08 1133 aaPredicted RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 SFMBT1Q9UHJ3 866 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 AGO1Q9UL18 857 aaKnown RBP7.2□□□□□ -1.26
HMGN1-205ENST00000419378 SLC8A2Q9UPR5 921 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 PLAAQ9Y263 795 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 ZNF510Q9Y2H8 683 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 ZNF281Q9Y2X9 895 aa7.2□□□□□ -1.26
HMGN1-205ENST00000419378 E5RJQ4 531 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 F8VZ95 297 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 TRIM24O15164 1050 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 PAPSS1O43252 624 aaPredicted RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 RFPL3O75679 317 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 PENKP01210 267 aaPredicted RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 LTFP02788 710 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 PRNPP04156 253 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 TPM2P07951 284 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 UCHL3P15374 230 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 ZNF18P17022 549 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 ENDOUP21128 410 aaKnown RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 HOXA6P31267 233 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 ACADSBP45954 432 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 CD97P48960 835 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 PXNP49023 591 aaPredicted RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 KLK7P49862 253 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 SRSF5Q13243 272 aaKnown RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 DMC1Q14565 340 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 DRAP1Q14919 205 aaPredicted RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 FKBP15Q5T1M5 1219 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 FYB2Q5VWT5 728 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 GRAMD4Q6IC98 578 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 CAVIN1Q6NZI2 390 aaKnown RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 TPGS1Q6ZTW0 290 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 SYT13Q7L8C5 426 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 TMEM110Q86TL2 294 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 LONP2Q86WA8 852 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 DTX1Q86Y01 620 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 DENND1CQ8IV53 801 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 PASD1Q8IV76 773 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 CCDC103Q8IW40 242 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 FAM217AQ8IXS0 508 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 WDTC1Q8N5D0 677 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 TERB1Q8NA31 727 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 SUMF1Q8NBK3 374 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 C1orf131Q8NDD1 294 aaKnown RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 ANKRD20A12PQ8NF67 263 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 DQX1Q8TE96 717 aaKnown RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 GOLGA1Q92805 767 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 PTPRN2Q92932 1015 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 NINJ1Q92982 152 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 FAM149B1Q96BN6 582 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 P2RY11Q96G91 374 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 XPO6Q96QU8 1125 aaKnown RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 CPXM1Q96SM3 734 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 VPS16Q9H269 839 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 GANQ9H2C0 597 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 HSD3B7Q9H2F3 369 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 EPC1Q9H2F5 836 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 DNAJC17Q9NVM6 304 aaKnown RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 ERVK13-1Q9NX77 482 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 PLK2Q9NYY3 685 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 WDR35Q9P2L0 1181 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 DEC1Q9P2X7 70 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 LIMA1Q9UHB6 759 aaKnown RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 SMG5Q9UPR3 1016 aaKnown RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 HBS1LQ9Y450 684 aaKnown RBP7.19□□□□□ -1.26
HMGN1-205ENST00000419378 TRAF6Q9Y4K3 522 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 DNAH14Q0VDD8 3507 aa7.19□□□□□ -1.26
HMGN1-205ENST00000419378 TBC1D3BA6NDS4 549 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 LGALS16A8MUM7 142 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 EPHB6O15197 1021 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 KLF8O95600 359 aaPredicted RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 APBB3O95704 486 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 LATS1O95835 1130 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 IGLV3-27P01718 113 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 FYNP06241 537 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 NCAM1P13591 858 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 PAMP19021 973 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 SPINK2P20155 84 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 KRT9P35527 623 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 CHKAP35790 457 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 TNFRSF4P43489 277 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 KIR2DL1P43626 348 aaPredicted RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 HARS2P49590 506 aaKnown RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 COPB1P53618 953 aaKnown RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 MRPS21P82921 87 aaKnown RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 PREPLQ4J6C6 727 aaPredicted RBP7.18□□□□□ -1.26
HMGN1-205ENST00000419378 ANO6Q4KMQ2 910 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 TRIM61Q5EBN2 209 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 C10orf76Q5T2E6 689 aa7.18□□□□□ -1.26
HMGN1-205ENST00000419378 RNF187Q5TA31 235 aaPredicted RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms