RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SH2D7A6NKC9 451 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 FAM157AC9JC47 383 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 PER2O15055 1255 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 SPRY3O43610 288 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 HBP1O60381 514 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 SERPINC1P01008 464 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 POLBP06746 335 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 WEE2P0C1S8 567 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 TNNT1P13805 278 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 PGGT1BP53609 377 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 Q0VFX4 171 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 TDGQ13569 410 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 ANKRD1Q15327 319 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 CAMK1DQ8IU85 385 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 ZDHHC23Q8IYP9 409 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 RASSF8Q8NHQ8 419 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 NPFFR1Q9GZQ6 430 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 SLC32A1Q9H598 525 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 TMEM160Q9NX00 188 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 RRN3Q9NYV6 651 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 HSF4Q9ULV5 492 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 PCDHA7Q9UN72 937 aa4.74□□□□□ -1.65
HMGB1P49-201ENST00000418882 C17orf102A2RUQ5 167 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 FAM90A8PA6NJQ4 464 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 ANP32CO43423 234 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 SLC25A17O43808 307 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 FAM90A13PP0C7W8 464 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 FAM90A24PP0C7X0 464 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 DCTDP32321 178 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 RFC1P35251 1148 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 CDKN2AP42771 156 aaKnown RBP4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 CDH12P55289 794 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 ZP1P60852 638 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 UBE3AQ05086 875 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 CHRNDQ07001 517 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 ZNF667Q5HYK9 610 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 WDR45BQ5MNZ6 344 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 ATG9BQ674R7 924 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 ATG16L1Q676U5 607 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 C17orf99Q6UX52 265 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 ANKRD18AQ8IVF6 992 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 GHDCQ8N2G8 530 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 USP38Q8NB14 1042 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 MYRIPQ8NFW9 859 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 MORC4Q8TE76 937 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 RAB40AQ8WXH6 277 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 ELP4Q96EB1 424 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 NAF1Q96HR8 494 aaKnown RBP4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 MARK4Q96L34 752 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 SCLT1Q96NL6 688 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 MSTO1Q9BUK6 570 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 MVB12BQ9H7P6 319 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 FBXO40Q9UH90 709 aa4.73□□□□□ -1.65
HMGB1P49-201ENST00000418882 ADGRF5Q8IZF2 1346 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 CLEC18AA5D8T8 446 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 GTPBP1O00178 669 aaKnown RBP4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 LIASO43766 372 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 IL1AP01583 271 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 MYZAPP0CAP1 466 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 HSD3B1P14060 373 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 CTPS1P17812 591 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 EDN2P20800 178 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 YWHAQP27348 245 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 ARSFP54793 590 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 ROR2Q01974 943 aaKnown RBP4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 GOLGA8FQ08AF8 430 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 FNBP1LQ5T0N5 605 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 LVRNQ6Q4G3 990 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 FAM83HQ6ZRV2 1179 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 MOB3CQ70IA8 216 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 MEPCEQ7L2J0 689 aaKnown RBP4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 MON1AQ86VX9 555 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 TEX45Q8NA69 505 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 CLEC18CQ8NCF0 446 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 RUFY2Q8WXA3 655 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 HSPH1Q92598 858 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 TMEM18Q96B42 140 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 ZNF333Q96JL9 665 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 LBHD1Q9BQE6 289 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 DCLK3Q9C098 648 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 TAOK3Q9H2K8 898 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 EPHX3Q9H6B9 360 aa4.72□□□□□ -1.65
HMGB1P49-201ENST00000418882 PABPN1LA6NDY0 278 aaKnown RBP4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 CBY3A6NI87 242 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 MS4A18H0YCH9 400 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 IFNL4K9M1U5 179 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 CEP104O60308 925 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 SOX30O94993 753 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 NGFRP08138 427 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 CHRM4P08173 479 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 ITGB6P18564 788 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 TTKP33981 857 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 CXCR3P49682 368 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 ERV3-1Q14264 604 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 MYBPC2Q14324 1141 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 NAA25Q14CX7 972 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 SLC4A8Q2Y0W8 1093 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 RBFAQ8N0V3 343 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 DNAAF1Q8NEP3 725 aa4.71□□□□□ -1.66
HMGB1P49-201ENST00000418882 SLC35F5Q8WV83 523 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms