RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 NT5DC3Q86UY8 548 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 OR2AP1Q8NGE2 309 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 PIP4K2CQ8TBX8 421 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 TOE1Q96GM8 510 aaKnown RBP18.97■□□□□ 0.63
PTCD3-204ENST00000418628 ZNF599Q96NL3 588 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 UBA2Q9UBT2 640 aaPredicted RBP18.97■□□□□ 0.63
PTCD3-204ENST00000418628 IPO11Q9UI26 975 aaKnown RBP18.97■□□□□ 0.63
PTCD3-204ENST00000418628 CAPN6Q9Y6Q1 641 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 LAMA1P25391 3075 aa18.97■□□□□ 0.63
PTCD3-204ENST00000418628 DFFAO00273 331 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 ACADMP11310 421 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 SLC8A1P32418 973 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 SLC10A2Q12908 348 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-204ENST00000418628 RFTN1Q14699 578 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-204ENST00000418628 ELF2Q15723 593 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 LPAL2Q16609 132 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 LRRC49Q8IUZ0 686 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 SLC41A1Q8IVJ1 513 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 RNF10Q8N5U6 811 aaKnown RBP18.96■□□□□ 0.63
PTCD3-204ENST00000418628 FATE1Q969F0 183 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 ZNF419Q96HQ0 510 aaPredicted RBP18.96■□□□□ 0.63
PTCD3-204ENST00000418628 TM6SF2Q9BZW4 377 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 TSGA10Q9BZW7 698 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 PCED1AQ9H1Q7 454 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 SP110Q9HB58 689 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 PCDHA3Q9Y5H8 950 aa18.96■□□□□ 0.63
PTCD3-204ENST00000418628 SCN8AQ9UQD0 1980 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 MACROD2A1Z1Q3 448 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 C1QTNF3-AMACRE9PGA6 284 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 RHOBTB1O94844 696 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 IL1BP01584 269 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 PRNPP04156 253 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 RETP07949 1114 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 ACSL1P33121 698 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 GARSP41250 739 aaKnown RBP18.95■□□□□ 0.62
PTCD3-204ENST00000418628 PEX5P50542 639 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 SNRPD1P62314 119 aaKnown RBP18.95■□□□□ 0.62
PTCD3-204ENST00000418628 RPL6Q02878 288 aaKnown RBP18.95■□□□□ 0.62
PTCD3-204ENST00000418628 GBE1Q04446 702 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 IFI16Q16666 785 aaKnown RBP18.95■□□□□ 0.62
PTCD3-204ENST00000418628 TMCO4Q5TGY1 634 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 AGBL4Q5VU57 503 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 FAM46CQ5VWP2 391 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 SPOCD1Q6ZMY3 1216 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 ZNF354CQ86Y25 554 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 ATPAF2Q8N5M1 289 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 EXD1Q8NHP7 514 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 KIAA1524Q8TCG1 905 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 LRIG1Q96JA1 1093 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 GDAP1L1Q96MZ0 367 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 OLFM3Q96PB7 478 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 TSGA13Q96PP4 275 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 HEPHQ9BQS7 1158 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 KCNF1Q9H3M0 494 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 SGK2Q9HBY8 427 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 FBXL12Q9NXK8 326 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 DTLQ9NZJ0 730 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 IL36AQ9UHA7 158 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 RAB23Q9ULC3 237 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 PCDHGA5Q9Y5G8 931 aa18.95■□□□□ 0.62
PTCD3-204ENST00000418628 hCG_1818297A0A087WSY0 165 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 A0A1W2PP55 124 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 SLC7A4O43246 635 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 GFRA3O60609 400 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 LEFTY1O75610 366 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 PALMO75781 387 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 CCDC175P0C221 793 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 TGM1P22735 817 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 PTPN7P35236 360 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 PTGER3P43115 390 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 RECQLP46063 649 aaPredicted RBP18.94■□□□□ 0.62
PTCD3-204ENST00000418628 PPP2R5EQ16537 467 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 PLA2G2CQ5R387 149 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 ATXN7L2Q5T6C5 722 aaPredicted RBP18.94■□□□□ 0.62
PTCD3-204ENST00000418628 PIP5KL1Q5T9C9 394 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 LPCAT2Q7L5N7 544 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 CADM4Q8NFZ8 388 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 MAML1Q92585 1016 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 ALG3Q92685 438 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 ARRDC3Q96B67 414 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 RNF25Q96BH1 459 aaPredicted RBP18.94■□□□□ 0.62
PTCD3-204ENST00000418628 HDAC11Q96DB2 347 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 PSKH2Q96QS6 385 aa18.94■□□□□ 0.62
PTCD3-204ENST00000418628 HECAQ9UBI9 543 aaPredicted RBP18.94■□□□□ 0.62
PTCD3-204ENST00000418628 FARP1Q9Y4F1 1045 aaPredicted RBP18.94■□□□□ 0.62
PTCD3-204ENST00000418628 ASCC3Q8N3C0 2202 aaKnown RBP18.94■□□□□ 0.62
PTCD3-204ENST00000418628 CABIN1Q9Y6J0 2220 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 BCLAF3A2AJT9 711 aaKnown RBP18.93■□□□□ 0.62
PTCD3-204ENST00000418628 CCDC66A2RUB6 948 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 MUSKO15146 869 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 KRT86O43790 486 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 BNIP3LO60238 219 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 LRP3O75074 770 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 IGSF6O95976 241 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 TNNT1P13805 278 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 CR2P20023 1033 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 ITGB7P26010 798 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 RGRP47804 291 aa18.93■□□□□ 0.62
PTCD3-204ENST00000418628 CSNK1DP48730 415 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms