RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 IFITM3Q01628 133 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 OCA2Q04671 838 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 ATP6AP1Q15904 470 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 INAVAQ3KP66 663 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 TKFCQ3LXA3 575 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 GTF2IRD2BQ6EKJ0 949 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 APOBEC3HQ6NTF7 200 aaKnown RBP8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 GTF2IRD2Q86UP8 949 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 SNX31Q8N9S9 440 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 LILRB4Q8NHJ6 448 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 TRIB2Q92519 343 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 MOCOSQ96EN8 888 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 CPXM1Q96SM3 734 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 LHX5Q9H2C1 402 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 FANCEQ9HB96 536 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 NMRAL1Q9HBL8 299 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 SCUBE2Q9NQ36 999 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 C8orf4Q9NR00 106 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 PKD2L2Q9NZM6 624 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 TRPC5Q9UL62 973 aaPredicted RBP8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 RAD54BQ9Y620 910 aa8.13□□□□□ -1.11
HMGXB4-202ENST00000418170 DDTLA6NHG4 134 aaPredicted RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 A8MU76 341 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 MGEA5O60502 916 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 PGAM1P18669 254 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 POLR2EP19388 210 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 EEF1DP29692 281 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 CAPGP40121 348 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 BFSP2Q13515 415 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 FAM209AQ5JX71 171 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 SAMD4BQ5PRF9 694 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 ZBTB41Q5SVQ8 909 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 CCNYL2Q5T2Q4 361 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 GRTP1Q5TC63 336 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 CDKL3Q8IVW4 592 aaPredicted RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 LRRN4Q8WUT4 740 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 CPNE1Q99829 537 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 CEP44Q9C0F1 390 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 HAPLN2Q9GZV7 340 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 IL22Q9GZX6 179 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 MAGEE1Q9HCI5 957 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 THG1LQ9NWX6 298 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 TMEM181Q9P2C4 612 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 IFT80Q9P2H3 777 aaPredicted RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 POLLQ9UGP5 575 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 MYO18AQ92614 2054 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 PAPPA2Q9BXP8 1791 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 RNF103-CHMP3A0A140T963 221 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 RASAL1O95294 804 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 CHEK2O96017 543 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 S100BP04271 92 aaPredicted RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 HSPA8P11142 646 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 TFE3P19532 575 aaPredicted RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 NR4A1P22736 598 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 CCR10P46092 362 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 GRIA4P48058 902 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 LEPRP48357 1165 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 PGS1Q32NB8 556 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 LIPMQ5VYY2 423 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 LRRC8EQ6NSJ5 796 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 PLEKHG7Q6ZR37 379 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 LINC00299Q6ZSB3 139 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 PARP8Q8N3A8 854 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 BPIFB6Q8NFQ5 453 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 IL31RAQ8NI17 732 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 ARNTL2Q8WYA1 636 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 NRBF2Q96F24 287 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 OSBPL10Q9BXB5 764 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 SEZ6LQ9BYH1 1024 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 MOV10Q9HCE1 1003 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 MID2Q9UJV3 735 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 A0A096LPK6 155 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 NRP1O14786 923 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 CST3P01034 146 aaPredicted RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 MPOP05164 745 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 PTPN9P43378 593 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 YAP1P46937 504 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 ADAM17P78536 824 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 IRF9Q00978 393 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 DNASE1L3Q13609 305 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 CYBRD1Q53TN4 286 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 TBCELQ5QJ74 424 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 REP15Q6BDI9 236 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 IQSEC1Q6DN90 963 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 XAF1Q6GPH4 301 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 USP51Q70EK9 711 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 KRT27Q7Z3Y8 459 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 SPRED1Q7Z699 444 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 PELI3Q8N2H9 469 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 DHRSXQ8N5I4 330 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 S100ZQ8WXG8 99 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 SLC45A3Q96JT2 553 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 MAELQ96JY0 434 aaKnown RBP8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 RBBP8Q99708 897 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 NAT9Q9BTE0 207 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 BEGAINQ9BUH8 593 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 FTHL17Q9BXU8 183 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 NIF3L1Q9GZT8 377 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 HOXD1Q9GZZ0 328 aa8.12□□□□□ -1.11
HMGXB4-202ENST00000418170 QTRT2Q9H974 415 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms