RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 MAF1Q9H063 256 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 SPATC1LQ9H0A9 340 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZHX3Q9H4I2 956 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 TUFT1Q9NNX1 390 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 A1CFQ9NQ94 594 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 TRMT13Q9NUP7 481 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 TYW1Q9NV66 732 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZSCAN32Q9NX65 697 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 COL20A1Q9P218 1284 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 ADD3Q9UEY8 706 aaKnown RBP4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 GDAQ9Y2T3 454 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 NFE2L3Q9Y4A8 694 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 RIPK3Q9Y572 518 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 UBIAD1Q9Y5Z9 338 aa4.12□□□□□ -1.75
HMGB3P20-201ENST00000417997 MCM3APO60318 1980 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 PVALEFA0A1B0GWK0 134 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 ARHGEF35A5YM69 484 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 PRRT4C9JH25 899 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 E9PMD0 336 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 BTN3A1O00481 513 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 PPP6CO00743 305 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 EDIL3O43854 480 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 TBC1D4O60343 1298 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 DKC1O60832 514 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 PSMD10O75832 226 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 FGFR1OPO95684 399 aaKnown RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 PLA2G4BP0C869 781 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 ARP10275 920 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 MUTP22033 750 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 SFNP31947 248 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 ALDH5A1P51649 535 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 JAK3P52333 1124 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 SPAG1Q07617 926 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 COASYQ13057 564 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 PPP2R5CQ13362 524 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 CTBP1Q13363 440 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 GTF2H3Q13889 308 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 CTTNQ14247 550 aaKnown RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 KCTD2Q14681 263 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 MLC1Q15049 377 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 LY6KQ17RY6 165 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 TBC1D25Q3MII6 688 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 PLA1AQ53H76 456 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 HSP90AA4PQ58FG1 418 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 CEP78Q5JTW2 689 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 HYIQ5T013 277 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 SPATA1Q5VX52 437 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC18B1Q6NT16 456 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 SLC2A7Q6PXP3 512 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 SERPINA13PQ6UXR4 307 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 DPY19L3Q6ZPD9 716 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 STXBP4Q6ZWJ1 553 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 CAND1Q86VP6 1230 aaKnown RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 CREBRFQ8IUR6 639 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 RP9Q8TA86 221 aaKnown RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 SPATA20Q8TB22 786 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 NOC3LQ8WTT2 800 aaKnown RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 TMEM171Q8WVE6 324 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 CTAGE1Q96RT6 745 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 PARK7Q99497 189 aaKnown RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 RIT2Q99578 217 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 EIF2AK1Q9BQI3 630 aaKnown RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 LXNQ9BS40 222 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 POLR3CQ9BUI4 534 aaPredicted RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 C1QTNF7Q9BXJ2 289 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 FSD1LQ9BXM9 530 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 SEMA4CQ9C0C4 833 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 XPO4Q9C0E2 1151 aaKnown RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 UNC45AQ9H3U1 944 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZMAT3Q9HA38 289 aaKnown RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 AGO4Q9HCK5 861 aaKnown RBP4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 TBC1D22BQ9NU19 505 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 BLOC1S4Q9NUP1 217 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 PANK4Q9NVE7 773 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 CYP39A1Q9NYL5 469 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZIM2Q9NZV7 527 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 IFNKQ9P0W0 207 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 GABBR1Q9UBS5 961 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 RWDD2AQ9UIY3 292 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 ZSWIM8A7E2V4 1837 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 SIP14410 1827 aa4.11□□□□□ -1.75
HMGB3P20-201ENST00000417997 A0A087WWL8 130 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 TRIM49BA6NDI0 452 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 MYMKA6NI61 221 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 TMEM233B4DJY2 109 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 KCNJ18B7U540 433 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 AP4M1O00189 453 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 PDHXO00330 501 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 PES1O00541 588 aaKnown RBP4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 KLRC4O43908 158 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 TPM1P09493 284 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 DLDP09622 509 aaKnown RBP4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 GAP43P17677 238 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 CYP11B2P19099 503 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 CCNE1P24864 410 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 CTGFP29279 349 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 ARHGAP25P42331 645 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 PRCPP42785 496 aa4.1□□□□□ -1.75
HMGB3P20-201ENST00000417997 DGKEP52429 567 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms